RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 ATP2B2Q01814 1243 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 AGXT2Q9BYV1 514 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 NCOA5Q9HCD5 579 aaKnown RBP12.53□□□□□ -0.4
CLN5-213ENST00000636681 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 PTPRFP10586 1907 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 A0A1W2PRG0 241 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 YY1P25490 414 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 ECE1P42892 770 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
CLN5-213ENST00000636681 WTAPQ15007 396 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 LRRC47Q8N1G4 583 aaKnown RBP12.53□□□□□ -0.4
CLN5-213ENST00000636681 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 KLRG1Q96E93 195 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 TMEM47Q9BQJ4 181 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 ZNF341Q9BYN7 854 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
CLN5-213ENST00000636681 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 PPP2R3BQ9Y5P8 575 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 MYH6P13533 1939 aa12.53□□□□□ -0.4
CLN5-213ENST00000636681 PLIN4Q96Q06 1357 aa12.52□□□□□ -0.4
CLN5-213ENST00000636681 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.41
CLN5-213ENST00000636681 ST18O60284 1047 aa12.52□□□□□ -0.41
CLN5-213ENST00000636681 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.41
CLN5-213ENST00000636681 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.52□□□□□ -0.41
CLN5-213ENST00000636681 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.41
CLN5-213ENST00000636681 ZNF112Q9UJU3 913 aa12.52□□□□□ -0.41
CLN5-213ENST00000636681 ANP32AP39687 249 aaKnown RBP12.51□□□□□ -0.41
CLN5-213ENST00000636681 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
CLN5-213ENST00000636681 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 IFIT1BQ5T764 474 aaKnown RBP12.51□□□□□ -0.41
CLN5-213ENST00000636681 CST9Q5W186 159 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLN5-213ENST00000636681 SNX21Q969T3 373 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 TMX3Q96JJ7 454 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 ALDH8A1Q9H2A2 487 aaPredicted RBP12.51□□□□□ -0.41
CLN5-213ENST00000636681 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 WDR19Q8NEZ3 1342 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 PDIA3P30101 505 aaKnown RBP12.51□□□□□ -0.41
CLN5-213ENST00000636681 CDC27P30260 824 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 VGLL4Q14135 290 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 ZYXQ15942 572 aaKnown RBP12.51□□□□□ -0.41
CLN5-213ENST00000636681 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 ZNF654Q8IZM8 581 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
CLN5-213ENST00000636681 CCDC17Q96LX7 622 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 CPVLQ9H3G5 476 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 LIMCH1Q9UPQ0 1083 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
CLN5-213ENST00000636681 GOLGA8BA8MQT2 603 aa12.5□□□□□ -0.41
CLN5-213ENST00000636681 CELF2O95319 508 aaKnown RBP12.5□□□□□ -0.41
CLN5-213ENST00000636681 LIFRP42702 1097 aa12.5□□□□□ -0.41
CLN5-213ENST00000636681 ICA1Q05084 483 aa12.5□□□□□ -0.41
CLN5-213ENST00000636681 TMEM179Q6ZVK1 233 aa12.5□□□□□ -0.41
CLN5-213ENST00000636681 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
CLN5-213ENST00000636681 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
CLN5-213ENST00000636681 SNCAIPQ9Y6H5 919 aa12.5□□□□□ -0.41
CLN5-213ENST00000636681 ERICH2A1L162 156 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 K7ELQ4 463 aaPredicted RBP12.49□□□□□ -0.41
CLN5-213ENST00000636681 RAD21O60216 631 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 ADD1P35611 737 aaKnown RBP12.49□□□□□ -0.41
CLN5-213ENST00000636681 NOVP48745 357 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 SCRN1Q12765 414 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 SGMS1Q86VZ5 419 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
CLN5-213ENST00000636681 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 PCNTO95613 3336 aa12.49□□□□□ -0.41
CLN5-213ENST00000636681 USP17L5A8MUK1 530 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 CTNND1O60716 968 aaKnown RBP12.48□□□□□ -0.41
CLN5-213ENST00000636681 TTLL1O95922 423 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 GOLGA8HP0CJ92 632 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 PTPRAP18433 802 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 TROAPQ12815 778 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 SART3Q15020 963 aaKnown RBP12.48□□□□□ -0.41
CLN5-213ENST00000636681 SLC35G1Q2M3R5 365 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 DGKHQ86XP1 1220 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 SCYL3Q8IZE3 742 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 SPICE1Q8N0Z3 855 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 STAG2Q8N3U4 1231 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 FBXL16Q8N461 479 aa12.48□□□□□ -0.41
CLN5-213ENST00000636681 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms