RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 NRBP1Q9UHY1 535 aa9.01□□□□□ -0.97
CIITA-214ENST00000636238 IVNS1ABPQ9Y6Y0 642 aa9.01□□□□□ -0.97
CIITA-214ENST00000636238 VCANP13611 3396 aa9.01□□□□□ -0.97
CIITA-214ENST00000636238 A0A1B0GUL7 405 aa9□□□□□ -0.97
CIITA-214ENST00000636238 PTPREP23469 700 aa9□□□□□ -0.97
CIITA-214ENST00000636238 ARID4AP29374 1257 aaPredicted RBP9□□□□□ -0.97
CIITA-214ENST00000636238 RTP1P59025 263 aa9□□□□□ -0.97
CIITA-214ENST00000636238 ATP2B2Q01814 1243 aa9□□□□□ -0.97
CIITA-214ENST00000636238 HDAC1Q13547 482 aaPredicted RBP9□□□□□ -0.97
CIITA-214ENST00000636238 GRB14Q14449 540 aa9□□□□□ -0.97
CIITA-214ENST00000636238 SPATA5Q8NB90 893 aa9□□□□□ -0.97
CIITA-214ENST00000636238 XAGE2Q96GT9 111 aa9□□□□□ -0.97
CIITA-214ENST00000636238 TRIM34Q9BYJ4 488 aa9□□□□□ -0.97
CIITA-214ENST00000636238 SIL1Q9H173 461 aa9□□□□□ -0.97
CIITA-214ENST00000636238 PORCNQ9H237 461 aa9□□□□□ -0.97
CIITA-214ENST00000636238 SLC5A4Q9NY91 659 aa9□□□□□ -0.97
CIITA-214ENST00000636238 FRMD4AQ9P2Q2 1039 aaPredicted RBP9□□□□□ -0.97
CIITA-214ENST00000636238 ZBTB21Q9ULJ3 1066 aa9□□□□□ -0.97
CIITA-214ENST00000636238 ALPK3Q96L96 1907 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 KBTBD13C9JR72 458 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 GNAI2P04899 355 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 HLA-DOAP06340 250 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 GNAI3P08754 354 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 FOSL2P15408 326 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 ADORA1P30542 326 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 RRP1BQ14684 758 aaKnown RBP8.99□□□□□ -0.97
CIITA-214ENST00000636238 CCL14Q16627 93 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 Q3C1V9 767 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 CEP85Q6P2H3 762 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 ABRAQ8N0Z2 381 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 CRACR2BQ8N4Y2 399 aaPredicted RBP8.99□□□□□ -0.97
CIITA-214ENST00000636238 SHCBP1Q8NEM2 672 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 ZNF384Q8TF68 577 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 KIAA1683Q9H0B3 1180 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 EHD4Q9H223 541 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 HMG20BQ9P0W2 317 aa8.99□□□□□ -0.97
CIITA-214ENST00000636238 PHIPQ8WWQ0 1821 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 PTPRFP10586 1907 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 FAM196BA6NMK8 535 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 TNFRSF10AO00220 468 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 SEPT4O43236 478 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 CYBAP13498 195 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 SHHQ15465 462 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 GORABQ5T7V8 394 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 CCDC174Q6PII3 467 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 SLC39A5Q6ZMH5 540 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 CATSPERGQ6ZRH7 1159 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 MB21D1Q8N884 522 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 ATXN2LQ8WWM7 1075 aaKnown RBP8.98□□□□□ -0.97
CIITA-214ENST00000636238 ZNF512BQ96KM6 892 aaPredicted RBP8.98□□□□□ -0.97
CIITA-214ENST00000636238 PAGR1Q9BTK6 254 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 EMILIN3Q9NT22 766 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 RAI14Q9P0K7 980 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 LRP2BPQ9P2M1 347 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 ARIH1Q9Y4X5 557 aaPredicted RBP8.98□□□□□ -0.97
CIITA-214ENST00000636238 TACC3Q9Y6A5 838 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 ROBO3Q96MS0 1386 aa8.98□□□□□ -0.97
CIITA-214ENST00000636238 CNMDO75829 334 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 SLURP2P0DP57 97 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 TIMM10P62072 90 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 NAA16Q6N069 864 aaPredicted RBP8.97□□□□□ -0.97
CIITA-214ENST00000636238 TATDN1Q6P1N9 297 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 RPAP2Q8IXW5 612 aaPredicted RBP8.97□□□□□ -0.97
CIITA-214ENST00000636238 FAM161BQ96MY7 647 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 TTYH1Q9H313 450 aaPredicted RBP8.97□□□□□ -0.97
CIITA-214ENST00000636238 DNAJC18Q9H819 358 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 GPR108Q9NPR9 543 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 PDLIM7Q9NR12 457 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 HOXC10Q9NYD6 342 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 ATP11BQ9Y2G3 1177 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 FLT1P17948 1338 aa8.97□□□□□ -0.97
CIITA-214ENST00000636238 PNMA6EA0A0J9YXQ4 647 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.96□□□□□ -0.98
CIITA-214ENST00000636238 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.96□□□□□ -0.98
CIITA-214ENST00000636238 APBB1O00213 710 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 KIAA0355O15063 1070 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 CNGA1P29973 690 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 ATN1P54259 1190 aaPredicted RBP8.96□□□□□ -0.98
CIITA-214ENST00000636238 ATP8B2P98198 1209 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 TFCP2Q12800 502 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 AKNAD1Q5T1N1 836 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 POTEEQ6S8J3 1075 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 SMC5Q8IY18 1101 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 SH3RF3Q8TEJ3 882 aaPredicted RBP8.96□□□□□ -0.98
CIITA-214ENST00000636238 MYLIPQ8WY64 445 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 TOX2Q96NM4 488 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 FEZ1Q99689 392 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 BCL11AQ9H165 835 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 MROH8Q9H579 483 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 FLRT1Q9NZU1 646 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 PHF24Q9UPV7 400 aa8.96□□□□□ -0.98
CIITA-214ENST00000636238 PA2G4Q9UQ80 394 aaKnown RBP8.96□□□□□ -0.98
CIITA-214ENST00000636238 SRGAP3O43295 1099 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 VCAM1P19320 739 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 COL9A1P20849 921 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 C9orf50Q5SZB4 431 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 ANKRD45Q5TZF3 282 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 DPP9Q86TI2 863 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 TTC6Q86TZ1 520 aa8.95□□□□□ -0.98
CIITA-214ENST00000636238 BADQ92934 168 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms