RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 KIF1BO60333 1816 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 PSDA5PKW4 1024 aaPredicted RBP7□□□□□ -1.29
GABRB3-218ENST00000635994 HEXIM1O94992 359 aaKnown RBP7□□□□□ -1.29
GABRB3-218ENST00000635994 GCP02774 474 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 LMNB1P20700 586 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 PPP2R5DQ14738 602 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 NONOQ15233 471 aaKnown RBP eCLIP7□□□□□ -1.29
GABRB3-218ENST00000635994 RPS6KA2Q15349 733 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 HADHQ16836 314 aaKnown RBP7□□□□□ -1.29
GABRB3-218ENST00000635994 C1orf228Q6PIY5 440 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 TRIM50Q86XT4 487 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 EFCAB13Q8IY85 973 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 NFATC2IPQ8NCF5 419 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 MED10Q9BTT4 135 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 KCNK9Q9NPC2 374 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 TFIP11Q9UBB9 837 aaKnown RBP7□□□□□ -1.29
GABRB3-218ENST00000635994 PARP2Q9UGN5 583 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 RBM8AQ9Y5S9 174 aaKnown RBP7□□□□□ -1.29
GABRB3-218ENST00000635994 RTL1A6NKG5 1358 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 TRIM37O94972 964 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 HOXB7P09629 217 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 MCM7P33993 719 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 KCTD2Q14681 263 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 AKNAD1Q5T1N1 836 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 DHX32Q7L7V1 743 aaKnown RBP7□□□□□ -1.29
GABRB3-218ENST00000635994 CHPF2Q9P2E5 772 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 PRAG1Q86YV5 1406 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
GABRB3-218ENST00000635994 KRT9P35527 623 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 PPP2R5AQ15172 486 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 ASIC2Q16515 512 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 ATP8A2Q9NTI2 1148 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 DONSONQ9NYP3 566 aa7□□□□□ -1.29
GABRB3-218ENST00000635994 TTC36A6NLP5 189 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 SRGAP2BP0DMP2 458 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 PDE6AP16499 860 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 USP14P54578 494 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 SH3BGRP55822 239 aaPredicted RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 AOC3Q16853 763 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 CYP26C1Q6V0L0 522 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 NLGN1Q8N2Q7 840 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 PPP2R3CQ969Q6 453 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 FAM81BQ96LP2 452 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 PCDHB13Q9Y5F0 798 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 AFF2P51816 1311 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 ERICH4A6NGS2 130 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 FLOT1O75955 427 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 KRT19P08727 400 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 LETM2Q2VYF4 491 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 CCDC62Q6P9F0 684 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 MTIF3Q9H2K0 278 aaKnown RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 TRMT1Q9NXH9 659 aaKnown RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 SEPT10Q9P0V9 454 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 ADD3Q9UEY8 706 aaKnown RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 BCS1LQ9Y276 419 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 RABGAP1Q9Y3P9 1069 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 PPARGP37231 505 aaPredicted RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 PRPSAP1Q14558 356 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 GBP6Q6ZN66 633 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 PHLDB2Q86SQ0 1253 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 UNC5CLQ8IV45 518 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 ZC3H15Q8WU90 426 aaKnown RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 GPCPD1Q9NPB8 672 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 RRP9O43818 475 aaKnown RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 EXOC3O60645 756 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 CC2D2BQ6DHV5 1058 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 Q6ZUG5 572 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 KRT27Q7Z3Y8 459 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 CCDC25Q86WR0 208 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 ZNF713Q8N859 430 aaPredicted RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 NACC1Q96RE7 527 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 TRIM56Q9BRZ2 755 aaKnown RBP6.99□□□□□ -1.29
GABRB3-218ENST00000635994 ELP1O95163 1332 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 MROH5Q6ZUA9 1318 aa6.99□□□□□ -1.29
GABRB3-218ENST00000635994 RBM6P78332 1123 aaKnown RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 RBBP5Q15291 538 aaKnown RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 KIAA1841Q6NSI8 718 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 FAM196AQ6ZSG2 479 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 ARHGAP27Q6ZUM4 889 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CEP120Q8N960 986 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 PLBD2Q8NHP8 589 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 NOC4LQ9BVI4 516 aaKnown RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 ANAPC5Q9UJX4 755 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 UTP11Q9Y3A2 253 aaKnown RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 PTPRTO14522 1441 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CPS1P31327 1500 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 EBAG9O00559 213 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 ARHGAP4P98171 946 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 PDE4DQ08499 809 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 UAP1Q16222 522 aaPredicted RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 SLC9C1Q4G0N8 1177 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 MBIPQ9NS73 344 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 MAP3K5Q99683 1374 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 TLR3O15455 904 aaKnown RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 PHBP35232 272 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CDR2Q01850 454 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms