RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 USP17L13C9JLJ4 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 USP17L11C9JVI0 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 USP17L18D6R9N7 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 USP17L22D6RA61 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 USP17L17D6RBQ6 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 USP17L19D6RCP7 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 USP17L20D6RJB6 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
PTPN11-206ENST00000635652 CAPN2P17655 700 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 MAPK4P31152 587 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 SHMT1P34896 483 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 USP17L24Q0WX57 530 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 Q3C1V9 767 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 LCORLQ8N3X6 602 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 ACER1Q8TDN7 264 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 GTF3C2Q8WUA4 911 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-206ENST00000635652 HMX1Q9NP08 348 aaPredicted RBP15.26■□□□□ 0.03
PTPN11-206ENST00000635652 PAG1Q9NWQ8 432 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 NR2E3Q9Y5X4 410 aa15.26■□□□□ 0.03
PTPN11-206ENST00000635652 PLXNB2O15031 1838 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 TCRBV5S4A2TA0A5A2 114 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 ATP5JP18859 108 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 TRIM32Q13049 653 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 SOCS4Q8WXH5 440 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 PAWRQ96IZ0 340 aaKnown RBP15.25■□□□□ 0.03
PTPN11-206ENST00000635652 C12orf42Q96LP6 360 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.25■□□□□ 0.03
PTPN11-206ENST00000635652 KIAA1683Q9H0B3 1180 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 CRISPLD2Q9H0B8 497 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 PORCNQ9H237 461 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 ARMT1Q9H993 441 aa15.25■□□□□ 0.03
PTPN11-206ENST00000635652 EVI5O60447 810 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 EVX2Q03828 476 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 SEPT2Q15019 361 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 C20orf194Q5TEA3 1177 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 CATSPERGQ6ZRH7 1159 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 PLEKHH3Q7Z736 793 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 TRIB2Q92519 343 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 LRRCC1Q9C099 1032 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 DCP1AQ9NPI6 582 aaPredicted RBP15.24■□□□□ 0.03
PTPN11-206ENST00000635652 LAMA3Q16787 3333 aa15.24■□□□□ 0.03
PTPN11-206ENST00000635652 MYH8P13535 1937 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 MBD4O95243 580 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 CYP2D6P10635 497 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 XRCC5P13010 732 aaKnown RBP15.23■□□□□ 0.03
PTPN11-206ENST00000635652 PRKAR2AP13861 404 aaKnown RBP15.23■□□□□ 0.03
PTPN11-206ENST00000635652 VCAM1P19320 739 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 ADD2P35612 726 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 FXR1P51114 621 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTPN11-206ENST00000635652 CCNA1P78396 465 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 GABPAQ06546 454 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 SLFNL1Q499Z3 407 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 WDR78Q5VTH9 848 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 POTEEQ6S8J3 1075 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 NECAB2Q7Z6G3 386 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 HAUS7Q99871 368 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
PTPN11-206ENST00000635652 RABGAP1Q9Y3P9 1069 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 DNAH12Q6ZR08 3092 aa15.23■□□□□ 0.03
PTPN11-206ENST00000635652 BAZ2AQ9UIF9 1905 aaKnown RBP15.23■□□□□ 0.03
PTPN11-206ENST00000635652 PRKAB2O43741 272 aa15.22■□□□□ 0.03
PTPN11-206ENST00000635652 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
PTPN11-206ENST00000635652 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
PTPN11-206ENST00000635652 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
PTPN11-206ENST00000635652 GUCY1A2P33402 732 aa15.22■□□□□ 0.03
PTPN11-206ENST00000635652 RGS2P41220 211 aa15.22■□□□□ 0.03
PTPN11-206ENST00000635652 TRMT44Q8IYL2 757 aaKnown RBP15.22■□□□□ 0.03
PTPN11-206ENST00000635652 ANKLE1Q8NAG6 615 aa15.22■□□□□ 0.03
PTPN11-206ENST00000635652 ATP8A2Q9NTI2 1148 aa15.22■□□□□ 0.03
PTPN11-206ENST00000635652 DDX60LQ5H9U9 1706 aaKnown RBP15.22■□□□□ 0.03
PTPN11-206ENST00000635652 MYH7P12883 1935 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 CNMDO75829 334 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 MORN1Q5T089 497 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 AMOTL1Q8IY63 956 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 SLC44A5Q8NCS7 719 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 DIS3LQ8TF46 1054 aaKnown RBP15.21■□□□□ 0.03
PTPN11-206ENST00000635652 USP6NLQ92738 828 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 DYNLL2Q96FJ2 89 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 RBM27Q9P2N5 1060 aaKnown RBP15.21■□□□□ 0.03
PTPN11-206ENST00000635652 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
PTPN11-206ENST00000635652 A0A1W2PRG0 241 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 CHGBP05060 677 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 CCL14Q16627 93 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 MAP3K21Q5TCX8 1036 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 ZSCAN25Q6NSZ9 544 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 TMEM179Q6ZVK1 233 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 TANGO6Q9C0B7 1094 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 BTBD7Q9P203 1132 aa15.2■□□□□ 0.02
PTPN11-206ENST00000635652 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
PTPN11-206ENST00000635652 USP17L12C9JPN9 530 aa15.19■□□□□ 0.02
PTPN11-206ENST00000635652 USP17L21D6R901 530 aa15.19■□□□□ 0.02
PTPN11-206ENST00000635652 CACNB2Q08289 660 aaPredicted RBP15.19■□□□□ 0.02
PTPN11-206ENST00000635652 MAP2K5Q13163 448 aa15.19■□□□□ 0.02
PTPN11-206ENST00000635652 COG2Q14746 738 aa15.19■□□□□ 0.02
PTPN11-206ENST00000635652 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
PTPN11-206ENST00000635652 APBA2Q99767 749 aa15.19■□□□□ 0.02
PTPN11-206ENST00000635652 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms