RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GRM1Q13255 1194 aa16.97■□□□□ 0.31
LINC00339-208ENST00000634934 SEPT2Q15019 361 aa16.97■□□□□ 0.31
LINC00339-208ENST00000634934 SART3Q15020 963 aaKnown RBP16.97■□□□□ 0.31
LINC00339-208ENST00000634934 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
LINC00339-208ENST00000634934 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC00339-208ENST00000634934 PICK1Q9NRD5 415 aa16.97■□□□□ 0.31
LINC00339-208ENST00000634934 CSADQ9Y600 493 aa16.97■□□□□ 0.31
LINC00339-208ENST00000634934 ERICH2A1L162 156 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 RASSF10A6NK89 507 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 ASNSP08243 561 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 ATP2B2Q01814 1243 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 TMEM67Q5HYA8 995 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 CYP4F22Q6NT55 531 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 CLEC10AQ8IUN9 316 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 SCYL3Q8IZE3 742 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 IL17RBQ9NRM6 502 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.96■□□□□ 0.31
LINC00339-208ENST00000634934 TNKSO95271 1327 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
LINC00339-208ENST00000634934 GUCY1A2P33402 732 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 SLC4A3P48751 1232 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 FKBP1BP68106 108 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 VGLL4Q14135 290 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 MAP3K11Q16584 847 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.96■□□□□ 0.3
LINC00339-208ENST00000634934 Q6ZUG5 572 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 ANKRD13AQ8IZ07 590 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 CEP95Q96GE4 821 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 TMEM87BQ96K49 555 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.3
LINC00339-208ENST00000634934 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 PLIN4Q96Q06 1357 aa16.96■□□□□ 0.3
LINC00339-208ENST00000634934 MYH8P13535 1937 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 IGKV6D-41A0A0C4DH26 115 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 VEGFBP49765 207 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 ICA1Q05084 483 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 WTAPQ15007 396 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 CCDC84Q86UT8 332 aaPredicted RBP16.95■□□□□ 0.3
LINC00339-208ENST00000634934 ENAHQ8N8S7 591 aaPredicted RBP16.95■□□□□ 0.3
LINC00339-208ENST00000634934 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 KANSL2Q9H9L4 492 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 GINM1Q9NU53 330 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 MTMR4Q9NYA4 1195 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
LINC00339-208ENST00000634934 SH2B2O14492 632 aaPredicted RBP16.94■□□□□ 0.3
LINC00339-208ENST00000634934 NOL9Q5SY16 702 aaKnown RBP16.94■□□□□ 0.3
LINC00339-208ENST00000634934 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
LINC00339-208ENST00000634934 IGDCC4Q8TDY8 1250 aa16.94■□□□□ 0.3
LINC00339-208ENST00000634934 MTA3Q9BTC8 594 aa16.94■□□□□ 0.3
LINC00339-208ENST00000634934 ELP3Q9H9T3 547 aa16.94■□□□□ 0.3
LINC00339-208ENST00000634934 ST18O60284 1047 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 TTLL1O95922 423 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 EEF2P13639 858 aaKnown RBP16.93■□□□□ 0.3
LINC00339-208ENST00000634934 PTPRAP18433 802 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 SEC23AQ15436 765 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 NFXL1Q6ZNB6 911 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 NOL8Q76FK4 1167 aaKnown RBP16.93■□□□□ 0.3
LINC00339-208ENST00000634934 DGKHQ86XP1 1220 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 BRF1Q92994 677 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 SNX21Q969T3 373 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 TTC14Q96N46 770 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 SNCAIPQ9Y6H5 919 aa16.93■□□□□ 0.3
LINC00339-208ENST00000634934 USP17L5A8MUK1 530 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 AK2P54819 239 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 RCSD1Q6JBY9 416 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 SLC10A4Q96EP9 437 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
LINC00339-208ENST00000634934 TBC1D2Q9BYX2 928 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 LY9Q9HBG7 655 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 SENP2Q9HC62 589 aa16.92■□□□□ 0.3
LINC00339-208ENST00000634934 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
LINC00339-208ENST00000634934 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 AOC2O75106 756 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
LINC00339-208ENST00000634934 TOB2Q14106 344 aaPredicted RBP16.91■□□□□ 0.3
LINC00339-208ENST00000634934 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 TMEM47Q9BQJ4 181 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 KAT14Q9H8E8 782 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 ARHGEF10LQ9HCE6 1279 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 NYAP2Q9P242 653 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 ZHX2Q9Y6X8 837 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
LINC00339-208ENST00000634934 TOP1P11387 765 aaKnown RBP16.91■□□□□ 0.3
LINC00339-208ENST00000634934 LIFRP42702 1097 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 APOBRQ0VD83 1088 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 SIAH1Q8IUQ4 282 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 LRRC47Q8N1G4 583 aaKnown RBP16.91■□□□□ 0.3
LINC00339-208ENST00000634934 TMTC2Q8N394 836 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 ACER1Q8TDN7 264 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 HHIPL1Q96JK4 782 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 ZIC5Q96T25 663 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 FEZ1Q99689 392 aa16.91■□□□□ 0.3
LINC00339-208ENST00000634934 ALDH8A1Q9H2A2 487 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms