RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 NBPF11Q86T75 865 aa11.56□□□□□ -0.56
SMARCA2-228ENST00000634772 TTC14Q96N46 770 aa11.56□□□□□ -0.56
SMARCA2-228ENST00000634772 NAPBQ9H115 298 aa11.56□□□□□ -0.56
SMARCA2-228ENST00000634772 AATFQ9NY61 560 aaKnown RBP eCLIP11.56□□□□□ -0.56
SMARCA2-228ENST00000634772 ANAPC4Q9UJX5 808 aa11.56□□□□□ -0.56
SMARCA2-228ENST00000634772 CSADQ9Y600 493 aa11.56□□□□□ -0.56
SMARCA2-228ENST00000634772 E7EWF7 191 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 K7ELQ4 463 aaPredicted RBP11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 EXOSC10Q01780 885 aaKnown RBP11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 APOBEC3HQ6NTF7 200 aaKnown RBP11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 C17orf99Q6UX52 265 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 DHX32Q7L7V1 743 aaKnown RBP11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 FBXL16Q8N461 479 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 WRNIP1Q96S55 665 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 PDRG1Q9NUG6 133 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 ADGRA2Q96PE1 1338 aa11.55□□□□□ -0.56
SMARCA2-228ENST00000634772 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 CETPP11597 493 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 RPS6KB1P23443 525 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 TDO2P48775 406 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 TNNI2P48788 182 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 NT5C2P49902 561 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 PPIL2Q13356 520 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 MOGSQ13724 837 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 ARHGEF6Q15052 776 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 UBE2Q1Q7Z7E8 422 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 ERO1BQ86YB8 467 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 TEKT1Q969V4 418 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 TRIM47Q96LD4 638 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 ZDHHC15Q96MV8 337 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 UPF3BQ9BZI7 483 aaKnown RBP11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 EPB41L4AQ9HCS5 686 aaPredicted RBP11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 DCP1AQ9NPI6 582 aaPredicted RBP11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 TAF6LQ9Y6J9 622 aa11.54□□□□□ -0.56
SMARCA2-228ENST00000634772 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 CD2BP2O95400 341 aaKnown RBP11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 FGRP09769 529 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 INPP5BP32019 993 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 BTDP43251 543 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 RHBDL3P58872 404 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 TRDNQ13061 729 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 SNAPC2Q13487 334 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 AKNAD1Q5T1N1 836 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 CTR9Q6PD62 1173 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 STOX1Q6ZVD7 989 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 NCOA7Q8NI08 942 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 SH3RF3Q8TEJ3 882 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 SDR42E1Q8WUS8 393 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 HOOK2Q96ED9 719 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 ZSCAN31Q96LW9 406 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 PRO3102Q9H379 93 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 RNF41Q9H4P4 317 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 CPA4Q9UI42 421 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 LIMCH1Q9UPQ0 1083 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 DAGLAQ9Y4D2 1042 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 WDR19Q8NEZ3 1342 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
SMARCA2-228ENST00000634772 USP17L12C9JPN9 530 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 USP17L21D6R901 530 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 OSBPP22059 807 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 USP5P45974 858 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 SLC4A3P48751 1232 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 PPARAQ07869 468 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 FAM83AQ86UY5 434 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 STAG1Q8WVM7 1258 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 MTA3Q9BTC8 594 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 KRT23Q9C075 422 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 NBPF3Q9H094 633 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 CNNM2Q9H8M5 875 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 ARPP21Q9UBL0 812 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 TRIOBPQ9H2D6 2365 aa11.52□□□□□ -0.57
SMARCA2-228ENST00000634772 GNRH1P01148 92 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 SLC3A2P08195 630 aaKnown RBP11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 MCM5P33992 734 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 PSMC4P43686 418 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 AK2P54819 239 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 PRMT2P55345 433 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 HAND2P61296 217 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 PPATQ06203 517 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 CUL4AQ13619 759 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 KIF22Q14807 665 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 C12orf60Q5U649 245 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 FKBP1CQ5VVH2 108 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 TEX11Q8IYF3 940 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 TMX3Q96JJ7 454 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 AGXT2Q9BYV1 514 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 USP40Q9NVE5 1235 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 SRRDQ9UH36 339 aa11.51□□□□□ -0.57
SMARCA2-228ENST00000634772 ZNF112Q9UJU3 913 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms