RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
UBE3A-223ENST00000631247 ASCC2Q9H1I8 757 aaPredicted RBP12.62□□□□□ -0.39
UBE3A-223ENST00000631247 TSHZ2Q9NRE2 1034 aa12.62□□□□□ -0.39
UBE3A-223ENST00000631247 H0YGN5 161 aa12.61□□□□□ -0.39
UBE3A-223ENST00000631247 FARP2O94887 1054 aaPredicted RBP12.61□□□□□ -0.39
UBE3A-223ENST00000631247 BACE1P56817 501 aa12.61□□□□□ -0.39
UBE3A-223ENST00000631247 DYNLL1P63167 89 aaKnown RBP12.61□□□□□ -0.39
UBE3A-223ENST00000631247 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
UBE3A-223ENST00000631247 PANK1Q8TE04 598 aa12.61□□□□□ -0.39
UBE3A-223ENST00000631247 U2AF1L4Q8WU68 220 aaKnown RBP12.61□□□□□ -0.39
UBE3A-223ENST00000631247 FEZ1Q99689 392 aa12.61□□□□□ -0.39
UBE3A-223ENST00000631247 GINM1Q9NU53 330 aa12.61□□□□□ -0.39
UBE3A-223ENST00000631247 ZBTB21Q9ULJ3 1066 aa12.61□□□□□ -0.39
UBE3A-223ENST00000631247 NAV1Q8NEY1 1877 aa12.61□□□□□ -0.39
UBE3A-223ENST00000631247 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 APBB1O00213 710 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 TFRCP02786 760 aaKnown RBP12.6□□□□□ -0.39
UBE3A-223ENST00000631247 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 TMED8Q6PL24 325 aaPredicted RBP12.6□□□□□ -0.39
UBE3A-223ENST00000631247 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
UBE3A-223ENST00000631247 DEFB118Q96PH6 123 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 DNAJC18Q9H819 358 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
UBE3A-223ENST00000631247 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 NDUFB9Q9Y6M9 179 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 SZT2Q5T011 3432 aa12.6□□□□□ -0.39
UBE3A-223ENST00000631247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
UBE3A-223ENST00000631247 C19orf81C9J6K1 198 aa12.59□□□□□ -0.39
UBE3A-223ENST00000631247 HMMRO75330 724 aa12.59□□□□□ -0.39
UBE3A-223ENST00000631247 SGPL1O95470 568 aa12.59□□□□□ -0.39
UBE3A-223ENST00000631247 TTF1Q15361 905 aaPredicted RBP12.59□□□□□ -0.39
UBE3A-223ENST00000631247 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
UBE3A-223ENST00000631247 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
UBE3A-223ENST00000631247 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
UBE3A-223ENST00000631247 GH2P01242 217 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 HMGCRP04035 888 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
UBE3A-223ENST00000631247 CAPN2P17655 700 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 HERVK_113P62684 666 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 PDE3AQ14432 1141 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
UBE3A-223ENST00000631247 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBE3A-223ENST00000631247 ANTXR1Q9H6X2 564 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 MORF4L1Q9UBU8 362 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 SERPINB13Q9UIV8 391 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 NR2E3Q9Y5X4 410 aa12.58□□□□□ -0.4
UBE3A-223ENST00000631247 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 DNAH12Q6ZR08 3092 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 IFIT2P09913 472 aaKnown RBP12.57□□□□□ -0.4
UBE3A-223ENST00000631247 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
UBE3A-223ENST00000631247 JAG1P78504 1218 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 ZYXQ15942 572 aaKnown RBP12.57□□□□□ -0.4
UBE3A-223ENST00000631247 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
UBE3A-223ENST00000631247 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 GPRC5AQ8NFJ5 357 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 GTF3C2Q8WUA4 911 aaPredicted RBP12.57□□□□□ -0.4
UBE3A-223ENST00000631247 SOCS4Q8WXH5 440 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 KIF1BPQ96EK5 621 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 DNAJC2Q99543 621 aaKnown RBP12.57□□□□□ -0.4
UBE3A-223ENST00000631247 PAGR1Q9BTK6 254 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 EHD4Q9H223 541 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 DDX19BQ9UMR2 479 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 TRIOBPQ9H2D6 2365 aa12.57□□□□□ -0.4
UBE3A-223ENST00000631247 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
UBE3A-223ENST00000631247 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
UBE3A-223ENST00000631247 CERKLQ49MI3 558 aaPredicted RBP12.56□□□□□ -0.4
UBE3A-223ENST00000631247 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
UBE3A-223ENST00000631247 UBE2Q1Q7Z7E8 422 aa12.56□□□□□ -0.4
UBE3A-223ENST00000631247 P2RX7Q99572 595 aaKnown RBP12.56□□□□□ -0.4
UBE3A-223ENST00000631247 NUDT12Q9BQG2 462 aa12.56□□□□□ -0.4
UBE3A-223ENST00000631247 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
UBE3A-223ENST00000631247 CHMP4BQ9H444 224 aaKnown RBP12.56□□□□□ -0.4
UBE3A-223ENST00000631247 HMX1Q9NP08 348 aaPredicted RBP12.56□□□□□ -0.4
UBE3A-223ENST00000631247 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
UBE3A-223ENST00000631247 PAK6Q9NQU5 681 aaPredicted RBP12.56□□□□□ -0.4
UBE3A-223ENST00000631247 MYH8P13535 1937 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 LAMA3Q16787 3333 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 GOLIM4O00461 696 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 EVI5O60447 810 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 CYP2B6P20813 491 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 MAPK4P31152 587 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 FXR1P51114 621 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE3A-223ENST00000631247 USP14P54578 494 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 ERVK-9P63128 1117 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 ERVK-24P63145 666 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 ABCB5Q2M3G0 1257 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 TATDN1Q6P1N9 297 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 RPAP2Q8IXW5 612 aaPredicted RBP12.55□□□□□ -0.4
UBE3A-223ENST00000631247 COG6Q9Y2V7 657 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 PLXNB2O15031 1838 aa12.55□□□□□ -0.4
UBE3A-223ENST00000631247 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
UBE3A-223ENST00000631247 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
UBE3A-223ENST00000631247 PDE6AP16499 860 aa12.54□□□□□ -0.4
UBE3A-223ENST00000631247 ZKSCAN1P17029 563 aaPredicted RBP12.54□□□□□ -0.4
UBE3A-223ENST00000631247 WDR78Q5VTH9 848 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms