RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 USP17L5A8MUK1 530 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 MINDY4BA8MYZ0 360 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 ZMYM6O95789 1325 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 ASNSP08243 561 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 DYNLL2Q96FJ2 89 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 DNAJC18Q9H819 358 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 CPA4Q9UI42 421 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 AGTPBP1Q9UPW5 1226 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 ZSWIM8A7E2V4 1837 aa22.17■■□□□ 1.14
PNKP-224ENST00000631020 BCRP11274 1271 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 GABPAQ06546 454 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 RRP1BQ14684 758 aaKnown RBP22.16■■□□□ 1.14
PNKP-224ENST00000631020 GADL1Q6ZQY3 521 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 EHD4Q9H223 541 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 AS3MTQ9HBK9 375 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 PPARAQ07869 468 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 CRACR2BQ8N4Y2 399 aaPredicted RBP22.16■■□□□ 1.14
PNKP-224ENST00000631020 WDR18Q9BV38 432 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 TRIM34Q9BYJ4 488 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.16■■□□□ 1.14
PNKP-224ENST00000631020 SERPINB13Q9UIV8 391 aa22.16■■□□□ 1.14
PNKP-224ENST00000631020 MGAMO43451 1857 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 SEC24BO95487 1268 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 CYP2C8P10632 490 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 SPP2Q13103 211 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 SH3D19Q5HYK7 790 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 ARHGAP39Q9C0H5 1083 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 NBPF3Q9H094 633 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 RBM8AQ9Y5S9 174 aaKnown RBP22.15■■□□□ 1.14
PNKP-224ENST00000631020 TACC3Q9Y6A5 838 aa22.15■■□□□ 1.14
PNKP-224ENST00000631020 PDE4DIPQ5VU43 2346 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 HAND2P61296 217 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 CTDSPL2Q05D32 466 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 NBPF11Q86T75 865 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 AMOTL1Q8IY63 956 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 STK11IPQ8N1F8 1099 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 SLC44A5Q8NCS7 719 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 CTNNA3Q9UI47 895 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 ANAPC4Q9UJX5 808 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 PNMA3Q9UL41 463 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 PTCH2Q9Y6C5 1203 aa22.14■■□□□ 1.13
PNKP-224ENST00000631020 U3KPZ7 1027 aaPredicted RBP22.14■■□□□ 1.13
PNKP-224ENST00000631020 HOXD10P28358 340 aa22.13■■□□□ 1.13
PNKP-224ENST00000631020 CCDC84Q86UT8 332 aaPredicted RBP22.13■■□□□ 1.13
PNKP-224ENST00000631020 INCENPQ9NQS7 918 aa22.13■■□□□ 1.13
PNKP-224ENST00000631020 KIAA0100Q14667 2235 aaKnown RBP22.12■■□□□ 1.13
PNKP-224ENST00000631020 REC8O95072 547 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 PSMC4P43686 418 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 PABPC4Q13310 644 aaKnown RBP eCLIP22.12■■□□□ 1.13
PNKP-224ENST00000631020 NECTIN1Q15223 517 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 SLC9C1Q4G0N8 1177 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 C16orf86Q6ZW13 317 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 ZNF333Q96JL9 665 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 TRIM47Q96LD4 638 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 ROBO3Q96MS0 1386 aa22.12■■□□□ 1.13
PNKP-224ENST00000631020 ZNF213O14771 459 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 SHMT1P34896 483 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 CDK8P49336 464 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 TATDN1Q6P1N9 297 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 SMCR8Q8TEV9 937 aaPredicted RBP22.11■■□□□ 1.13
PNKP-224ENST00000631020 SRRDQ9UH36 339 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 TAF6LQ9Y6J9 622 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 CYP21A2P08686 494 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 CTGFP29279 349 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 BACE1P56817 501 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 TREML2Q5T2D2 321 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 TBC1D10CQ8IV04 446 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 USP26Q9BXU7 913 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 TAOK2Q9UL54 1235 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 ZBTB21Q9ULJ3 1066 aa22.11■■□□□ 1.13
PNKP-224ENST00000631020 C19orf81C9J6K1 198 aa22.1■■□□□ 1.13
PNKP-224ENST00000631020 HMGCS2P54868 508 aa22.1■■□□□ 1.13
PNKP-224ENST00000631020 FCGRTP55899 365 aa22.1■■□□□ 1.13
PNKP-224ENST00000631020 IMMTQ16891 758 aaKnown RBP22.1■■□□□ 1.13
PNKP-224ENST00000631020 BRCA2P51587 3418 aa22.09■■□□□ 1.13
PNKP-224ENST00000631020 FMNL1O95466 1100 aaPredicted RBP22.09■■□□□ 1.13
PNKP-224ENST00000631020 JAG1P78504 1218 aa22.09■■□□□ 1.13
PNKP-224ENST00000631020 SWAP70Q9UH65 585 aa22.09■■□□□ 1.13
PNKP-224ENST00000631020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.09■■□□□ 1.13
PNKP-224ENST00000631020 PRDM1O75626 825 aa22.08■■□□□ 1.13
PNKP-224ENST00000631020 FGRP09769 529 aa22.08■■□□□ 1.13
PNKP-224ENST00000631020 OSBPP22059 807 aa22.08■■□□□ 1.13
PNKP-224ENST00000631020 GCLCP48506 637 aaPredicted RBP22.08■■□□□ 1.13
PNKP-224ENST00000631020 SHROOM1Q2M3G4 852 aaPredicted RBP22.08■■□□□ 1.13
PNKP-224ENST00000631020 CREB3L3Q68CJ9 461 aa22.08■■□□□ 1.13
PNKP-224ENST00000631020 USP17L10C9JJH3 530 aa22.07■■□□□ 1.12
PNKP-224ENST00000631020 SLC27A2O14975 620 aa22.07■■□□□ 1.12
PNKP-224ENST00000631020 RASA1P20936 1047 aa22.07■■□□□ 1.12
PNKP-224ENST00000631020 HOXA7P31268 230 aaPredicted RBP22.07■■□□□ 1.12
PNKP-224ENST00000631020 MTMR2Q13614 643 aa22.07■■□□□ 1.12
PNKP-224ENST00000631020 FAM110CQ1W6H9 321 aa22.07■■□□□ 1.12
PNKP-224ENST00000631020 NKX2-3Q8TAU0 364 aa22.07■■□□□ 1.12
PNKP-224ENST00000631020 MYPNQ86TC9 1320 aa22.07■■□□□ 1.12
PNKP-224ENST00000631020 EPB41L2O43491 1005 aaKnown RBP22.06■■□□□ 1.12
PNKP-224ENST00000631020 GDF11O95390 407 aa22.06■■□□□ 1.12
PNKP-224ENST00000631020 SLC3A2P08195 630 aaKnown RBP22.06■■□□□ 1.12
PNKP-224ENST00000631020 AKNAD1Q5T1N1 836 aa22.06■■□□□ 1.12
PNKP-224ENST00000631020 STAG1Q8WVM7 1258 aa22.06■■□□□ 1.12
PNKP-224ENST00000631020 TMEM106CQ9BVX2 250 aa22.06■■□□□ 1.12
PNKP-224ENST00000631020 TSHZ2Q9NRE2 1034 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms