RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DZIP1LQ8IYY4 767 aaKnown RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 ZKSCAN4Q969J2 545 aaPredicted RBP5.97□□□□□ -1.45
LINC00550-201ENST00000629293 PTPN22Q9Y2R2 807 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 PTCH2Q9Y6C5 1203 aa5.97□□□□□ -1.45
LINC00550-201ENST00000629293 GRM8O00222 908 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 PRMT3O60678 531 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 CAP1Q01518 475 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 METTL24Q5JXM2 366 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 KLHDC4Q8TBB5 520 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 WRNIP1Q96S55 665 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 PRDM9Q9NQV7 894 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 TMOD2Q9NZR1 351 aa5.96□□□□□ -1.45
LINC00550-201ENST00000629293 HRO43593 1189 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 CRKP46108 304 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 FOXO4P98177 505 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 TCP10Q12799 353 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 GRIK5Q16478 980 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 FAM43AQ8N2R8 423 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 ADAM32Q8TC27 787 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 BRI3BPQ8WY22 251 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 ARHGAP39Q9C0H5 1083 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 ZFYVE28Q9HCC9 887 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 DNAAF2Q9NVR5 837 aaKnown RBP5.96□□□□□ -1.46
LINC00550-201ENST00000629293 SPEF2Q9C093 1822 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 IGHA2P01877 340 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 WEE1P30291 646 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 TNNI2P48788 182 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 CASP7P55210 303 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 ZNF211Q13398 564 aaPredicted RBP5.96□□□□□ -1.46
LINC00550-201ENST00000629293 SLFNL1Q499Z3 407 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 INTS3Q68E01 1043 aaKnown RBP5.96□□□□□ -1.46
LINC00550-201ENST00000629293 PTCRAQ6ISU1 281 aaPredicted RBP5.96□□□□□ -1.46
LINC00550-201ENST00000629293 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.96□□□□□ -1.46
LINC00550-201ENST00000629293 NBPF11Q86T75 865 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 DPF3Q92784 378 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 GCC1Q96CN9 775 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 ZBED3Q96IU2 234 aaPredicted RBP5.96□□□□□ -1.46
LINC00550-201ENST00000629293 PLA2G12BQ9BX93 195 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 SRCIN1Q9C0H9 1055 aa5.96□□□□□ -1.46
LINC00550-201ENST00000629293 DNMT3AQ9Y6K1 912 aaPredicted RBP5.96□□□□□ -1.46
LINC00550-201ENST00000629293 VAMP4O75379 141 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 MRPL58Q14197 206 aaKnown RBP5.95□□□□□ -1.46
LINC00550-201ENST00000629293 KIF22Q14807 665 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 GPKOWQ92917 476 aaPredicted RBP eCLIP5.95□□□□□ -1.46
LINC00550-201ENST00000629293 FAM84BQ96KN1 310 aaPredicted RBP5.95□□□□□ -1.46
LINC00550-201ENST00000629293 ASB16Q96NS5 453 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 CPA4Q9UI42 421 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 POTEB3A0JP26 581 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 IL1R1P14778 569 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 BCAMP50895 628 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 PDE3AQ14432 1141 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 EML3Q32P44 896 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 KMT5BQ4FZB7 885 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 LRRC24Q50LG9 513 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 CAVIN4Q5BKX8 364 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 C4orf48Q5BLP8 95 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 BEND3Q5T5X7 828 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 POTEBQ6S5H4 581 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 SUCLG2Q96I99 432 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 PPP2R3BQ9Y5P8 575 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 BCAR3O75815 825 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 FMNL1O95466 1100 aaPredicted RBP5.95□□□□□ -1.46
LINC00550-201ENST00000629293 NBPF7P0C2Y1 421 aaPredicted RBP5.95□□□□□ -1.46
LINC00550-201ENST00000629293 NPR3P17342 541 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 MCCD1P59942 119 aaPredicted RBP5.95□□□□□ -1.46
LINC00550-201ENST00000629293 ARHGEF6Q15052 776 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 WDR63Q8IWG1 891 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 TEKT1Q969V4 418 aa5.95□□□□□ -1.46
LINC00550-201ENST00000629293 SSC5DA1L4H1 1573 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 COL6A3P12111 3177 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 SFI1A8K8P3 1242 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 CCNYL3P0C7X3 344 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 GTF2A2P52657 109 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 SKAP1Q86WV1 359 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 PRIMPOLQ96LW4 560 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 SIL1Q9H173 461 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 BICC1Q9H694 974 aaKnown RBP5.94□□□□□ -1.46
LINC00550-201ENST00000629293 INPP5BP32019 993 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 PTK2Q05397 1052 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 MTFR1Q15390 333 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 MAP3K11Q16584 847 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 SEPT3Q9UH03 358 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 ZNF609O15014 1411 aa5.94□□□□□ -1.46
LINC00550-201ENST00000629293 BTBD19C9JJ37 291 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 H0YGN5 161 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 MMP14P50281 582 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 UBE4AQ14139 1066 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 VARS2Q5ST30 1063 aaKnown RBP5.93□□□□□ -1.46
LINC00550-201ENST00000629293 ZSCAN29Q8IWY8 852 aaPredicted RBP5.93□□□□□ -1.46
LINC00550-201ENST00000629293 FAM177A1Q8N128 213 aaPredicted RBP5.93□□□□□ -1.46
LINC00550-201ENST00000629293 TDRD7Q8NHU6 1098 aaKnown RBP5.93□□□□□ -1.46
LINC00550-201ENST00000629293 RAET1EQ8TD07 263 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 H3BRB1 525 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 PSMC4P43686 418 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 SNAPC2Q13487 334 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 ZNF333Q96JL9 665 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 CFHR5Q9BXR6 569 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 TUT1Q9H6E5 874 aaKnown RBP5.93□□□□□ -1.46
LINC00550-201ENST00000629293 CETPP11597 493 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms