RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 KRT40Q6A162 431 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 FAM173BQ6P4H8 233 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 FOXD4L3Q6VB84 417 aaPredicted RBP15.04■□□□□ -0
RAB5B-211ENST00000628569 METTL16Q86W50 562 aaKnown RBP15.04■□□□□ -0
RAB5B-211ENST00000628569 NIM1KQ8IY84 436 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 KLHL34Q8N239 644 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 CTCFLQ8NI51 663 aaPredicted RBP15.04■□□□□ -0
RAB5B-211ENST00000628569 SLC26A6Q9BXS9 759 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 KAT14Q9H8E8 782 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 GDPD2Q9HCC8 539 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 FAM198AQ9UFP1 575 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 SERPINB13Q9UIV8 391 aa15.04■□□□□ -0
RAB5B-211ENST00000628569 CNTNAP5Q8WYK1 1306 aa15.03■□□□□ -0
RAB5B-211ENST00000628569 FIBPO43427 364 aa15.03■□□□□ -0
RAB5B-211ENST00000628569 PPFIA3O75145 1194 aa15.03■□□□□ -0
RAB5B-211ENST00000628569 GADD45BO75293 160 aaPredicted RBP15.03■□□□□ -0
RAB5B-211ENST00000628569 KIF5BP33176 963 aa15.03■□□□□ -0
RAB5B-211ENST00000628569 GRM4Q14833 912 aa15.03■□□□□ -0
RAB5B-211ENST00000628569 PNMA1Q8ND90 353 aa15.03■□□□□ -0
RAB5B-211ENST00000628569 LEO1Q8WVC0 666 aaPredicted RBP15.03■□□□□ -0
RAB5B-211ENST00000628569 ZNF396Q96N95 335 aaPredicted RBP15.03■□□□□ -0
RAB5B-211ENST00000628569 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.03■□□□□ -0
RAB5B-211ENST00000628569 FHDC1Q9C0D6 1143 aaPredicted RBP15.03■□□□□ -0
RAB5B-211ENST00000628569 PCDHAC2Q9Y5I4 1007 aa15.03■□□□□ -0
RAB5B-211ENST00000628569 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 SPDYE6P0CI01 402 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 U2AF2P26368 475 aaKnown RBP eCLIP15.02■□□□□ -0
RAB5B-211ENST00000628569 SHMT1P34896 483 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 ZNF445P59923 1031 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 GUCY1B3Q02153 619 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 FKBP1CQ5VVH2 108 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 ZBED3Q96IU2 234 aaPredicted RBP15.02■□□□□ -0
RAB5B-211ENST00000628569 AIFM3Q96NN9 605 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 TMEM47Q9BQJ4 181 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 SYT17Q9BSW7 474 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 RBM27Q9P2N5 1060 aaKnown RBP15.02■□□□□ -0
RAB5B-211ENST00000628569 RCOR1Q9UKL0 485 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 HDAC9Q9UKV0 1011 aa15.02■□□□□ -0
RAB5B-211ENST00000628569 FSD2A1L4K1 749 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 PLEKHA8P1O95397 391 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 MMP1P03956 469 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 TOP1P11387 765 aaKnown RBP15.01□□□□□ -0.01
RAB5B-211ENST00000628569 GNAQP50148 359 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 RBM5P52756 815 aaKnown RBP eCLIP15.01□□□□□ -0.01
RAB5B-211ENST00000628569 TRIM29Q14134 588 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 PKN1Q16512 942 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 PPP4R3BQ5MIZ7 849 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 MYSM1Q5VVJ2 828 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 OTUD7BQ6GQQ9 843 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 FOXP4Q8IVH2 680 aaPredicted RBP15.01□□□□□ -0.01
RAB5B-211ENST00000628569 PRMT6Q96LA8 375 aaPredicted RBP15.01□□□□□ -0.01
RAB5B-211ENST00000628569 SPATA32Q96LK8 384 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 CCDC17Q96LX7 622 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 RTEL1Q9NZ71 1219 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 PI4KBQ9UBF8 816 aa15.01□□□□□ -0.01
RAB5B-211ENST00000628569 PALM3A6NDB9 673 aaPredicted RBP15□□□□□ -0.01
RAB5B-211ENST00000628569 KIF28PB7ZC32 967 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 RAD17O75943 681 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 SMARCA1P28370 1054 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 GUCY1A2P33402 732 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 FOSBP53539 338 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 CXCL9Q07325 125 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 CIAPIN1Q6FI81 312 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 CAVIN1Q6NZI2 390 aaKnown RBP15□□□□□ -0.01
RAB5B-211ENST00000628569 TATDN1Q6P1N9 297 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 SH3BP5LQ7L8J4 393 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 ZFPM1Q8IX07 1006 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 FAM177A1Q8N128 213 aaPredicted RBP15□□□□□ -0.01
RAB5B-211ENST00000628569 SRBD1Q8N5C6 995 aaKnown RBP15□□□□□ -0.01
RAB5B-211ENST00000628569 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
RAB5B-211ENST00000628569 LZTS2Q9BRK4 669 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 DNAJC18Q9H819 358 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 GJB4Q9NTQ9 266 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 POLR3EQ9NVU0 708 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 TMEM63CQ9P1W3 806 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 MAD2L2Q9UI95 211 aa15□□□□□ -0.01
RAB5B-211ENST00000628569 DICER1Q9UPY3 1922 aaKnown RBP15□□□□□ -0.01
RAB5B-211ENST00000628569 DDTLA6NHG4 134 aaPredicted RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 RPS12P25398 132 aaKnown RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 DEKP35659 375 aaKnown RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 NASPP49321 788 aaPredicted RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 AKAP17AQ02040 695 aaKnown RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
RAB5B-211ENST00000628569 OGFOD1Q8N543 542 aa14.99□□□□□ -0.01
RAB5B-211ENST00000628569 JDP2Q8WYK2 163 aa14.99□□□□□ -0.01
RAB5B-211ENST00000628569 CEP95Q96GE4 821 aa14.99□□□□□ -0.01
RAB5B-211ENST00000628569 USP28Q96RU2 1077 aa14.99□□□□□ -0.01
RAB5B-211ENST00000628569 GZF1Q9H116 711 aaPredicted RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 FOXP1Q9H334 677 aaPredicted RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 TDRD3Q9H7E2 651 aaKnown RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 MTMR4Q9NYA4 1195 aa14.99□□□□□ -0.01
RAB5B-211ENST00000628569 TFIP11Q9UBB9 837 aaKnown RBP14.99□□□□□ -0.01
RAB5B-211ENST00000628569 MYH4Q9Y623 1939 aa14.98□□□□□ -0.01
RAB5B-211ENST00000628569 UBE2Q2LH0YL09 131 aa14.98□□□□□ -0.01
RAB5B-211ENST00000628569 YEATS4O95619 227 aa14.98□□□□□ -0.01
RAB5B-211ENST00000628569 SNHG28P0DPA3 235 aa14.98□□□□□ -0.01
RAB5B-211ENST00000628569 AKR1B1P15121 316 aa14.98□□□□□ -0.01
RAB5B-211ENST00000628569 XBP1P17861 261 aa14.98□□□□□ -0.01
RAB5B-211ENST00000628569 TNIP1Q15025 636 aa14.98□□□□□ -0.01
RAB5B-211ENST00000628569 DLGAP5Q15398 846 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms