RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 SLC4A8Q2Y0W8 1093 aa9.55□□□□□ -0.88
CHD2-213ENST00000628118 SH3D19Q5HYK7 790 aa9.55□□□□□ -0.88
CHD2-213ENST00000628118 VPS53Q5VIR6 699 aa9.55□□□□□ -0.88
CHD2-213ENST00000628118 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
CHD2-213ENST00000628118 PRRT2Q7Z6L0 340 aaPredicted RBP9.55□□□□□ -0.88
CHD2-213ENST00000628118 SH2D4AQ9H788 454 aa9.55□□□□□ -0.88
CHD2-213ENST00000628118 SLC45A1Q9Y2W3 748 aa9.55□□□□□ -0.88
CHD2-213ENST00000628118 CYP2D7A0A087X1C5 515 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 CCL15-CCL14A0A0B4J2E2 113 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 USP17L10C9JJH3 530 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 ZNF213O14771 459 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 MAP3K13O43283 966 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 ORC4O43929 436 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 GDF11O95390 407 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 GH2P01242 217 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 BACE1P56817 501 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
CHD2-213ENST00000628118 PABPC4Q13310 644 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD2-213ENST00000628118 CCL15Q16663 113 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 IMMTQ16891 758 aaKnown RBP9.54□□□□□ -0.88
CHD2-213ENST00000628118 NOM1Q5C9Z4 860 aaKnown RBP9.54□□□□□ -0.88
CHD2-213ENST00000628118 ANKRD23Q86SG2 305 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 IFNL1Q8IU54 200 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 PROCA1Q8NCQ7 364 aaPredicted RBP9.54□□□□□ -0.88
CHD2-213ENST00000628118 DYNLL2Q96FJ2 89 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 ZIC5Q96T25 663 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 KANSL2Q9H9L4 492 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 SYNPO2Q9UMS6 1093 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 PHIPQ8WWQ0 1821 aa9.54□□□□□ -0.88
CHD2-213ENST00000628118 PLIN4Q96Q06 1357 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 MPHOSPH10O00566 681 aaKnown RBP9.53□□□□□ -0.88
CHD2-213ENST00000628118 EPB41L2O43491 1005 aaKnown RBP9.53□□□□□ -0.88
CHD2-213ENST00000628118 HSPA1AP0DMV8 641 aaKnown RBP9.53□□□□□ -0.88
CHD2-213ENST00000628118 HSPA1BP0DMV9 641 aaKnown RBP9.53□□□□□ -0.88
CHD2-213ENST00000628118 SLURP2P0DP57 97 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 RASA1P20936 1047 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 CTCFP49711 727 aaPredicted RBP9.53□□□□□ -0.88
CHD2-213ENST00000628118 SPP2Q13103 211 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 RAB3GAP1Q15042 981 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 USP17L2Q6R6M4 530 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 STAG1Q8WVM7 1258 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 BRI3BPQ8WY22 251 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 C12orf42Q96LP6 360 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 KIAA1683Q9H0B3 1180 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 RNF186Q9NXI6 227 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
CHD2-213ENST00000628118 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
CHD2-213ENST00000628118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
CHD2-213ENST00000628118 PTPRFP10586 1907 aa9.52□□□□□ -0.88
CHD2-213ENST00000628118 TRIM75PA6NK02 468 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 TSPY3P0CV98 308 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 TSPY8P0CW00 308 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 AKR1B1P15121 316 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 GUCY1A2P33402 732 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 ICA1Q05084 483 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 SEPT2Q15019 361 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 CCDC178Q5BJE1 867 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 AKNAD1Q5T1N1 836 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 MFSD6Q6ZSS7 791 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 LPAR1Q92633 364 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 MAP4K1Q92918 833 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 FEZ1Q99689 392 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 NYAP2Q9P242 653 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 PNMA3Q9UL41 463 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 AGTPBP1Q9UPW5 1226 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 LAMA4Q16363 1823 aa9.52□□□□□ -0.89
CHD2-213ENST00000628118 GREB1LQ9C091 1923 aaPredicted RBP9.51□□□□□ -0.89
CHD2-213ENST00000628118 TSPY2A6NKD2 308 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 BTBD19C9JJ37 291 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 IGF2BP3O00425 579 aaKnown RBP eCLIP9.51□□□□□ -0.89
CHD2-213ENST00000628118 REC8O95072 547 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 OSBPP22059 807 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 HOXA7P31268 230 aaPredicted RBP9.51□□□□□ -0.89
CHD2-213ENST00000628118 JAG1P78504 1218 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 MTMR2Q13614 643 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 MOGSQ13724 837 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 SKAP1Q86WV1 359 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 GTF3C2Q8WUA4 911 aaPredicted RBP9.51□□□□□ -0.89
CHD2-213ENST00000628118 ESR2Q92731 530 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 PARK7Q99497 189 aaKnown RBP9.51□□□□□ -0.89
CHD2-213ENST00000628118 PTPN18Q99952 460 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 KRT23Q9C075 422 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 IL25Q9H293 177 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 PRDM10Q9NQV6 1147 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 TCP11L1Q9NUJ3 509 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 TMX2Q9Y320 296 aa9.51□□□□□ -0.89
CHD2-213ENST00000628118 LOC285556D6RIA3 1793 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 IGKV6D-41A0A0C4DH26 115 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 PDHXO00330 501 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
CHD2-213ENST00000628118 RANBP6O60518 1105 aaKnown RBP9.5□□□□□ -0.89
CHD2-213ENST00000628118 TRPA1O75762 1119 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 TTLL1O95922 423 aa9.5□□□□□ -0.89
CHD2-213ENST00000628118 HMGCS2P54868 508 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms