RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 BTBD7Q9P203 1132 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 PA2G4Q9UQ80 394 aaKnown RBP10.64□□□□□ -0.71
TCF4-258ENST00000627320 PTPRSQ13332 1948 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 TRANK1O15050 2925 aa10.64□□□□□ -0.71
TCF4-258ENST00000627320 KIF16BQ96L93 1317 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 SALL1Q9NSC2 1324 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 MYH8P13535 1937 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 BACE1P56817 501 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 MECOMQ03112 1051 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 SNX17Q15036 470 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 MICALL1Q8N3F8 863 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 LPIN2Q92539 896 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 EDC3Q96F86 508 aaKnown RBP10.63□□□□□ -0.71
TCF4-258ENST00000627320 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.63□□□□□ -0.71
TCF4-258ENST00000627320 PBX4Q9BYU1 374 aa10.63□□□□□ -0.71
TCF4-258ENST00000627320 OSBPL5Q9H0X9 879 aaPredicted RBP10.63□□□□□ -0.71
TCF4-258ENST00000627320 IGHA2P01877 340 aa10.62□□□□□ -0.71
TCF4-258ENST00000627320 MAPK4P31152 587 aa10.62□□□□□ -0.71
TCF4-258ENST00000627320 HOXA7P31268 230 aaPredicted RBP10.62□□□□□ -0.71
TCF4-258ENST00000627320 CCDC102BQ68D86 513 aa10.62□□□□□ -0.71
TCF4-258ENST00000627320 C16orf59Q7L2K0 433 aa10.62□□□□□ -0.71
TCF4-258ENST00000627320 SH3RF3Q8TEJ3 882 aaPredicted RBP10.62□□□□□ -0.71
TCF4-258ENST00000627320 NAV1Q8NEY1 1877 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 TBC1D12O60347 775 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 PQBP1O60828 265 aaKnown RBP10.61□□□□□ -0.71
TCF4-258ENST00000627320 IGFBP4P22692 258 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 PTPREP23469 700 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 PABPC4Q13310 644 aaKnown RBP eCLIP10.61□□□□□ -0.71
TCF4-258ENST00000627320 LRRC41Q15345 812 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 MFSD14CQ5VZR4 134 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 MAPKAPK5Q8IW41 473 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
TCF4-258ENST00000627320 CWC22Q9HCG8 908 aaKnown RBP10.61□□□□□ -0.71
TCF4-258ENST00000627320 TMOD4Q9NZQ9 345 aa10.61□□□□□ -0.71
TCF4-258ENST00000627320 WDFY4Q6ZS81 3184 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 BRWD1Q9NSI6 2320 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 GPR75-ASB3A0A0A6YYF3 556 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 KBTBD13C9JR72 458 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 COBLO75128 1261 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 PGK1P00558 417 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 ACRP10323 421 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 BMP1P13497 986 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 TAL1P17542 331 aaPredicted RBP10.6□□□□□ -0.71
TCF4-258ENST00000627320 TIMM10P62072 90 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 MRPS5P82675 430 aaKnown RBP10.6□□□□□ -0.71
TCF4-258ENST00000627320 ATP2B2Q01814 1243 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 EVX2Q03828 476 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 GRB14Q14449 540 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 KRT40Q6A162 431 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 ADGRA1Q86SQ6 560 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 CCAR1Q8IX12 1150 aaKnown RBP10.6□□□□□ -0.71
TCF4-258ENST00000627320 ATXN2LQ8WWM7 1075 aaKnown RBP10.6□□□□□ -0.71
TCF4-258ENST00000627320 WDR18Q9BV38 432 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 USP44Q9H0E7 712 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 NKX2-4Q9H2Z4 354 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 SAP30BPQ9UHR5 308 aaKnown RBP10.6□□□□□ -0.71
TCF4-258ENST00000627320 DENND2AQ9ULE3 1009 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 ZBTB21Q9ULJ3 1066 aa10.6□□□□□ -0.71
TCF4-258ENST00000627320 YBX2Q9Y2T7 364 aaKnown RBP10.6□□□□□ -0.71
TCF4-258ENST00000627320 SYNGAP1Q96PV0 1343 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 RFXAPO00287 272 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 CLTBP09497 229 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 MYOGP15173 224 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 FPGSQ05932 587 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 TEX11Q8IYF3 940 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 TRMT44Q8IYL2 757 aaKnown RBP10.59□□□□□ -0.71
TCF4-258ENST00000627320 ACER1Q8TDN7 264 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 ANKS1AQ92625 1134 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 GAS2L1Q99501 681 aaPredicted RBP10.59□□□□□ -0.71
TCF4-258ENST00000627320 AS3MTQ9HBK9 375 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
TCF4-258ENST00000627320 PIEZO1Q92508 2521 aa10.58□□□□□ -0.72
TCF4-258ENST00000627320 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.58□□□□□ -0.72
TCF4-258ENST00000627320 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.58□□□□□ -0.72
TCF4-258ENST00000627320 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
TCF4-258ENST00000627320 USP17L10C9JJH3 530 aa10.58□□□□□ -0.72
TCF4-258ENST00000627320 RAG1P15918 1043 aa10.58□□□□□ -0.72
TCF4-258ENST00000627320 RABGGTBP53611 331 aa10.58□□□□□ -0.72
TCF4-258ENST00000627320 FAAP100Q0VG06 881 aa10.58□□□□□ -0.72
TCF4-258ENST00000627320 CCDC129Q6ZRS4 1044 aa10.58□□□□□ -0.72
TCF4-258ENST00000627320 NSUN4Q96CB9 384 aaKnown RBP10.58□□□□□ -0.72
TCF4-258ENST00000627320 CXXC1Q9P0U4 656 aaPredicted RBP10.58□□□□□ -0.72
TCF4-258ENST00000627320 A0A1W2PQ45 241 aaPredicted RBP10.57□□□□□ -0.72
TCF4-258ENST00000627320 A0A1W2PQY0 241 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 MYADML2A6NDP7 307 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 SLC15A5A6NIM6 579 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 KIAA0355O15063 1070 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 GH2P01242 217 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 ADORA2AP29274 412 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 TMEM240Q5SV17 173 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 SPRED2Q7Z698 418 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 FAM163AQ96GL9 167 aaPredicted RBP10.57□□□□□ -0.72
TCF4-258ENST00000627320 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 CD320Q9NPF0 282 aa10.57□□□□□ -0.72
TCF4-258ENST00000627320 AATFQ9NY61 560 aaKnown RBP eCLIP10.57□□□□□ -0.72
TCF4-258ENST00000627320 HMG20BQ9P0W2 317 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms