RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 SLC44A5Q8NCS7 719 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 ZNF280CQ8ND82 737 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 WDR18Q9BV38 432 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 TRIM17Q9Y577 477 aa17.48■□□□□ 0.39
PNKP-221ENST00000627317 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
PNKP-221ENST00000627317 LAMA4Q16363 1823 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 USP17L5A8MUK1 530 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 SMIM22K7EJ46 135 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 ASNSP08243 561 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 CYP2C8P10632 490 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 BCRP11274 1271 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 SHMT1P34896 483 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 RGS19P49795 217 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 LACTBP83111 547 aaPredicted RBP17.47■□□□□ 0.39
PNKP-221ENST00000627317 PTH1RQ03431 593 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 SPP2Q13103 211 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 SH3D19Q5HYK7 790 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 PARK7Q99497 189 aaKnown RBP17.47■□□□□ 0.39
PNKP-221ENST00000627317 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 GINM1Q9NU53 330 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 ZBTB21Q9ULJ3 1066 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 AGTPBP1Q9UPW5 1226 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 MYH8P13535 1937 aa17.47■□□□□ 0.39
PNKP-221ENST00000627317 GDF11O95390 407 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 CTGFP29279 349 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 CDK8P49336 464 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 HAND2P61296 217 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 PDE4BQ07343 736 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 IMMTQ16891 758 aaKnown RBP17.46■□□□□ 0.39
PNKP-221ENST00000627317 PROCA1Q8NCQ7 364 aaPredicted RBP17.46■□□□□ 0.39
PNKP-221ENST00000627317 ARHGAP39Q9C0H5 1083 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 LSG1Q9H089 658 aaKnown RBP17.46■□□□□ 0.39
PNKP-221ENST00000627317 MKNK2Q9HBH9 465 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 CPA4Q9UI42 421 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 ANAPC4Q9UJX5 808 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 PTPN22Q9Y2R2 807 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 ZSWIM8A7E2V4 1837 aa17.46■□□□□ 0.39
PNKP-221ENST00000627317 BRCA2P51587 3418 aa17.45■□□□□ 0.38
PNKP-221ENST00000627317 ZNF213O14771 459 aa17.45■□□□□ 0.38
PNKP-221ENST00000627317 REC8O95072 547 aa17.45■□□□□ 0.38
PNKP-221ENST00000627317 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
PNKP-221ENST00000627317 CERKLQ49MI3 558 aaPredicted RBP17.45■□□□□ 0.38
PNKP-221ENST00000627317 GADL1Q6ZQY3 521 aa17.45■□□□□ 0.38
PNKP-221ENST00000627317 EFCC1Q9HA90 598 aa17.45■□□□□ 0.38
PNKP-221ENST00000627317 RBM8AQ9Y5S9 174 aaKnown RBP17.45■□□□□ 0.38
PNKP-221ENST00000627317 HMGCS2P54868 508 aa17.44■□□□□ 0.38
PNKP-221ENST00000627317 MAP4K1Q92918 833 aa17.44■□□□□ 0.38
PNKP-221ENST00000627317 MPHOSPH10O00566 681 aaKnown RBP17.43■□□□□ 0.38
PNKP-221ENST00000627317 TNRC18O15417 2968 aaPredicted RBP17.43■□□□□ 0.38
PNKP-221ENST00000627317 PRDM1O75626 825 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 GH2P01242 217 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 BACE1P56817 501 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 MTMR2Q13614 643 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 ABCB5Q2M3G0 1257 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 TRIM47Q96LD4 638 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 CCDC17Q96LX7 622 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 RNF41Q9H4P4 317 aaPredicted RBP17.43■□□□□ 0.38
PNKP-221ENST00000627317 AS3MTQ9HBK9 375 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 CABP5Q9NP86 173 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
PNKP-221ENST00000627317 EIF5BO60841 1220 aaKnown RBP17.42■□□□□ 0.38
PNKP-221ENST00000627317 RASA1P20936 1047 aa17.42■□□□□ 0.38
PNKP-221ENST00000627317 GUCY1A2P33402 732 aa17.42■□□□□ 0.38
PNKP-221ENST00000627317 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
PNKP-221ENST00000627317 ZNF444Q8N0Y2 327 aaPredicted RBP17.42■□□□□ 0.38
PNKP-221ENST00000627317 ARMC5Q96C12 935 aa17.42■□□□□ 0.38
PNKP-221ENST00000627317 PCP11498 1178 aaKnown RBP17.41■□□□□ 0.38
PNKP-221ENST00000627317 AKR1B1P15121 316 aa17.41■□□□□ 0.38
PNKP-221ENST00000627317 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
PNKP-221ENST00000627317 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
PNKP-221ENST00000627317 MFSD6Q6ZSS7 791 aa17.41■□□□□ 0.38
PNKP-221ENST00000627317 STAG1Q8WVM7 1258 aa17.41■□□□□ 0.38
PNKP-221ENST00000627317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.41■□□□□ 0.38
PNKP-221ENST00000627317 ORC4O43929 436 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 GNRH1P01148 92 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 TMEM179Q6ZVK1 233 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 NBPF3Q9H094 633 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 EMILIN3Q9NT22 766 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
PNKP-221ENST00000627317 C19orf81C9J6K1 198 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 USP17L10C9JJH3 530 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 RANBP6O60518 1105 aaKnown RBP17.39■□□□□ 0.37
PNKP-221ENST00000627317 CYP21A2P08686 494 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
PNKP-221ENST00000627317 SOX10P56693 466 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 ARHGEF6Q15052 776 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 C12orf42Q96LP6 360 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 KIAA1683Q9H0B3 1180 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 ASCC2Q9H1I8 757 aaPredicted RBP17.39■□□□□ 0.37
PNKP-221ENST00000627317 INCENPQ9NQS7 918 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 NEDD4P46934 1319 aa17.39■□□□□ 0.37
PNKP-221ENST00000627317 TSPY2A6NKD2 308 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 SLC27A2O14975 620 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 TSPY3P0CV98 308 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 TSPY8P0CW00 308 aa17.38■□□□□ 0.37
PNKP-221ENST00000627317 PSMC4P43686 418 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms