RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ANO6Q4KMQ2 910 aa25.43■■□□□ 1.66
PNKP-220ENST00000627232 ZNF622Q969S3 477 aaKnown RBP eCLIP25.43■■□□□ 1.66
PNKP-220ENST00000627232 CAMKK2Q96RR4 588 aa25.43■■□□□ 1.66
PNKP-220ENST00000627232 RRAGDQ9NQL2 400 aaPredicted RBP25.43■■□□□ 1.66
PNKP-220ENST00000627232 RGS17Q9UGC6 210 aaPredicted RBP25.43■■□□□ 1.66
PNKP-220ENST00000627232 WDHD1O75717 1129 aaPredicted RBP25.42■■□□□ 1.66
PNKP-220ENST00000627232 CDK8P49336 464 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 SRBD1Q8N5C6 995 aaKnown RBP25.42■■□□□ 1.66
PNKP-220ENST00000627232 STK32BQ9NY57 414 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 CCDC39Q9UFE4 941 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 USP25Q9UHP3 1055 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 TAOK2Q9UL54 1235 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 MORC2Q9Y6X9 1032 aaPredicted RBP25.42■■□□□ 1.66
PNKP-220ENST00000627232 KRT2P35908 639 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 GNAQP50148 359 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 GRM4Q14833 912 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 STX1AQ16623 288 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 OLFM4Q6UX06 510 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 PODNQ7Z5L7 613 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 CERS5Q8N5B7 392 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 PNMA1Q8ND90 353 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 TIGD1Q96MW7 591 aa25.42■■□□□ 1.66
PNKP-220ENST00000627232 RTN4Q9NQC3 1192 aaKnown RBP25.42■■□□□ 1.66
PNKP-220ENST00000627232 SLX4Q8IY92 1834 aa25.41■■□□□ 1.66
PNKP-220ENST00000627232 SNED1Q8TER0 1413 aa25.41■■□□□ 1.66
PNKP-220ENST00000627232 G3V3G9 751 aa25.41■■□□□ 1.66
PNKP-220ENST00000627232 MARCKSP29966 332 aaPredicted RBP25.41■■□□□ 1.66
PNKP-220ENST00000627232 TOB1P50616 345 aaPredicted RBP25.41■■□□□ 1.66
PNKP-220ENST00000627232 DCAF8Q5TAQ9 597 aa25.41■■□□□ 1.66
PNKP-220ENST00000627232 ANO8Q9HCE9 1232 aaPredicted RBP25.41■■□□□ 1.66
PNKP-220ENST00000627232 BRMS1Q9HCU9 246 aa25.41■■□□□ 1.66
PNKP-220ENST00000627232 PFKFB1P16118 471 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 FKBP1AP62942 108 aaKnown RBP25.4■■□□□ 1.66
PNKP-220ENST00000627232 DOK7Q18PE1 504 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 HHIPL2Q6UWX4 724 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 ZSCAN30Q86W11 494 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 NEDD1Q8NHV4 660 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 FBXW7Q969H0 707 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 CNKSR1Q969H4 720 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 SHISA4Q96DD7 197 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 CBX8Q9HC52 389 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 VPS54Q9P1Q0 977 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 CEP131Q9UPN4 1083 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 HPSEQ9Y251 543 aa25.4■■□□□ 1.66
PNKP-220ENST00000627232 ZNF202O95125 648 aa25.39■■□□□ 1.66
PNKP-220ENST00000627232 ADCY5O95622 1261 aa25.39■■□□□ 1.66
PNKP-220ENST00000627232 EZH2Q15910 746 aaKnown RBP25.39■■□□□ 1.66
PNKP-220ENST00000627232 RESP18Q5W5W9 173 aa25.39■■□□□ 1.66
PNKP-220ENST00000627232 POTEAQ6S8J7 498 aa25.39■■□□□ 1.66
PNKP-220ENST00000627232 SLC44A5Q8NCS7 719 aa25.39■■□□□ 1.66
PNKP-220ENST00000627232 OXER1Q8TDS5 423 aa25.39■■□□□ 1.66
PNKP-220ENST00000627232 SDF4Q9BRK5 362 aa25.39■■□□□ 1.66
PNKP-220ENST00000627232 TTF2Q9UNY4 1162 aaKnown RBP25.39■■□□□ 1.66
PNKP-220ENST00000627232 SCG2P13521 617 aa25.38■■□□□ 1.65
PNKP-220ENST00000627232 NR5A1Q13285 461 aa25.38■■□□□ 1.65
PNKP-220ENST00000627232 PFKFB3Q16875 520 aaPredicted RBP25.38■■□□□ 1.65
PNKP-220ENST00000627232 KRI1Q8N9T8 703 aaKnown RBP25.38■■□□□ 1.65
PNKP-220ENST00000627232 ZNF646O15015 1829 aaPredicted RBP25.38■■□□□ 1.65
PNKP-220ENST00000627232 USP17L3A6NCW0 530 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 USP17L4A6NCW7 530 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 CLCN1P35523 988 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 ZNF165P49910 485 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 USP17L1Q7RTZ2 530 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 ANO10Q9NW15 660 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 MYH8P13535 1937 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 SHC4Q6S5L8 630 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 LZTS2Q9BRK4 669 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 MRIQ9BWK5 157 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 DNAJC25Q9H1X3 360 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 SH3GLB2Q9NR46 395 aa25.37■■□□□ 1.65
PNKP-220ENST00000627232 PLIN4Q96Q06 1357 aa25.36■■□□□ 1.65
PNKP-220ENST00000627232 EN1Q05925 392 aaPredicted RBP25.36■■□□□ 1.65
PNKP-220ENST00000627232 TEKT1Q969V4 418 aa25.36■■□□□ 1.65
PNKP-220ENST00000627232 TMEM47Q9BQJ4 181 aa25.36■■□□□ 1.65
PNKP-220ENST00000627232 NOL7Q9UMY1 257 aaKnown RBP25.36■■□□□ 1.65
PNKP-220ENST00000627232 PTPREP23469 700 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 SYKP43405 635 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 NOVP48745 357 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 CC2D2BQ6DHV5 1058 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 LUZP1Q86V48 1076 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 FAM177A1Q8N128 213 aaPredicted RBP25.35■■□□□ 1.65
PNKP-220ENST00000627232 ZNF579Q8NAF0 562 aaKnown RBP25.35■■□□□ 1.65
PNKP-220ENST00000627232 TNFRSF25Q93038 417 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 CABP5Q9NP86 173 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 MAD2L2Q9UI95 211 aa25.35■■□□□ 1.65
PNKP-220ENST00000627232 hCG_1642624A0A1W2PR95 340 aa25.34■■□□□ 1.65
PNKP-220ENST00000627232 F8W031 263 aaPredicted RBP25.34■■□□□ 1.65
PNKP-220ENST00000627232 BMP15O95972 392 aa25.34■■□□□ 1.65
PNKP-220ENST00000627232 NPY5RQ15761 445 aa25.34■■□□□ 1.65
PNKP-220ENST00000627232 KIAA1468Q9P260 1216 aa25.34■■□□□ 1.65
PNKP-220ENST00000627232 FBXO2Q9UK22 296 aaPredicted RBP25.34■■□□□ 1.65
PNKP-220ENST00000627232 ADAMTSL1Q8N6G6 1762 aa25.34■■□□□ 1.65
PNKP-220ENST00000627232 MYO3BQ8WXR4 1341 aa25.33■■□□□ 1.65
PNKP-220ENST00000627232 GABPAQ06546 454 aa25.33■■□□□ 1.65
PNKP-220ENST00000627232 STRIP1Q5VSL9 837 aa25.33■■□□□ 1.65
PNKP-220ENST00000627232 ELOA2Q8IYF1 753 aaPredicted RBP25.33■■□□□ 1.65
PNKP-220ENST00000627232 USP40Q9NVE5 1235 aa25.33■■□□□ 1.65
PNKP-220ENST00000627232 PCDHB6Q9Y5E3 794 aa25.33■■□□□ 1.65
PNKP-220ENST00000627232 PALM3A6NDB9 673 aaPredicted RBP25.32■■□□□ 1.64
PNKP-220ENST00000627232 TRIM75PA6NK02 468 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms