RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 FOXP4Q8IVH2 680 aaPredicted RBP8.79□□□□□ -1
PTP4A1-206ENST00000627002 ZSCAN29Q8IWY8 852 aaPredicted RBP8.79□□□□□ -1
PTP4A1-206ENST00000627002 CRACR2BQ8N4Y2 399 aaPredicted RBP8.79□□□□□ -1
PTP4A1-206ENST00000627002 FANCBQ8NB91 859 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 SLC44A5Q8NCS7 719 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 FAM151AQ8WW52 585 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 WASF1Q92558 559 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 DDX11Q96FC9 970 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 ZBED3Q96IU2 234 aaPredicted RBP8.79□□□□□ -1
PTP4A1-206ENST00000627002 MAP3K14Q99558 947 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 MYOZ2Q9NPC6 264 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 PSME4Q14997 1843 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 STK36Q9NRP7 1315 aa8.79□□□□□ -1
PTP4A1-206ENST00000627002 ARFGEF1Q9Y6D6 1849 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 VPS37CA5D8V6 355 aaPredicted RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 H3BQV1 296 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 KIF3CO14782 793 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 TOMM70O94826 608 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 BAG4O95429 457 aaKnown RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 F13A1P00488 732 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 CDC27P30260 824 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 ADD1P35611 737 aaKnown RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 TNNI2P48788 182 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 GMPSP49915 693 aaPredicted RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 PRELPP51888 382 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 SSRP1Q08945 709 aaKnown RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 NBR1Q14596 966 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 RCSD1Q6JBY9 416 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 FAM83AQ86UY5 434 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 METTL16Q86W50 562 aaKnown RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 RAB11FIP4Q86YS3 637 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 CTCFLQ8NI51 663 aaPredicted RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 NUP133Q8WUM0 1156 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 MYL10Q9BUA6 226 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 TSPYL2Q9H2G4 693 aaPredicted RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 IL17RBQ9NRM6 502 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 ORC3Q9UBD5 711 aaPredicted RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 HERC5Q9UII4 1024 aaKnown RBP8.78□□□□□ -1
PTP4A1-206ENST00000627002 MTMR6Q9Y217 621 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 GJA3Q9Y6H8 435 aa8.78□□□□□ -1
PTP4A1-206ENST00000627002 CLRN2A0PK11 232 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 DDTLA6NHG4 134 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 TCP10L2B9ZVM9 353 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 H7C1D1 291 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 WNT10BO00744 389 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 NMT2O60551 498 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 TOP1P11387 765 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 RXRAP19793 462 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 SHMT1P34896 483 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 NOVP48745 357 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 GNAQP50148 359 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 TROAPQ12815 778 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 TNFAIP1Q13829 316 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 NTRK3Q16288 839 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 FOXD4L5Q5VV16 416 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 SH3BP5LQ7L8J4 393 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 ZFPM1Q8IX07 1006 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 MICALL2Q8IY33 904 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 CCDC144CPQ8IYA2 1237 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 GPC2Q8N158 579 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 PLCD3Q8N3E9 789 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 PNMA1Q8ND90 353 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 FOXD4L4Q8WXT5 416 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 C8orf76Q96K31 380 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 CSRNP1Q96S65 589 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 ZSCAN16Q9H4T2 348 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 CNOT7Q9UIV1 285 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 STX8Q9UNK0 236 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 BAZ2AQ9UIF9 1905 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 FOCADQ5VW36 1801 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 ZNF541Q9H0D2 1346 aa8.77□□□□□ -1.01
PTP4A1-206ENST00000627002 ADAMTSL1Q8N6G6 1762 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 IGKV6D-41A0A0C4DH26 115 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 FDPSP14324 419 aaKnown RBP8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 AKR1B1P15121 316 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 AKAP17AQ02040 695 aaKnown RBP8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 TRIM29Q14134 588 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 CSPP1Q1MSJ5 1256 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 CERKLQ49MI3 558 aaPredicted RBP8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 TATDN1Q6P1N9 297 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 CEP95Q96GE4 821 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 MS4A3Q96HJ5 214 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 TMEM47Q9BQJ4 181 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 LZTS2Q9BRK4 669 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 ALG1Q9BT22 464 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 ANP32EQ9BTT0 268 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 SLC26A6Q9BXS9 759 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 VEZTQ9HBM0 779 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 MTMR4Q9NYA4 1195 aa8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 RBM27Q9P2N5 1060 aaKnown RBP8.76□□□□□ -1.01
PTP4A1-206ENST00000627002 CNTNAP1P78357 1384 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 MPHOSPH10O00566 681 aaKnown RBP8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 TBC1D12O60347 775 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 DTNBO60941 627 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 DEXIO95424 95 aa8.75□□□□□ -1.01
PTP4A1-206ENST00000627002 TTLL1O95922 423 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms