RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 SEMA3EO15041 775 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 WDHD1O75717 1129 aaPredicted RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 ANXA1P04083 346 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 IGKV5-2P06315 115 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 HSPD1P10809 573 aaKnown RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 ERCC5P28715 1186 aaPredicted RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 MDM2Q00987 491 aaPredicted RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 PTPN12Q05209 780 aaKnown RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CASP8Q14790 479 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 PTPAQ15257 358 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 TUBB8Q3ZCM7 444 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 HSP90B2PQ58FF3 399 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 DNAJC21Q5F1R6 531 aaKnown RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 MMS22LQ6ZRQ5 1243 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 SEC62Q99442 399 aaKnown RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 LRRC2Q9BYS8 371 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 SIL1Q9H173 461 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 FANCLQ9NW38 375 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 IQSEC3Q9UPP2 1182 aaPredicted RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 FAN1Q9Y2M0 1017 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 ADGRG1Q9Y653 693 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 ITIH6Q6UXX5 1313 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CTAGE15A4D2H0 777 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 KIF5CO60282 957 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 SHOX2O60902 331 aaPredicted RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 PRPF6O94906 941 aaKnown RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CTAGE8P0CG41 777 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 PBX1P40424 430 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 USP8P40818 1118 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 PSEN2P49810 448 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 GYS2P54840 703 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CABP4P57796 275 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 GUCY1B3Q02153 619 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 SLC39A6Q13433 755 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CWF19L2Q2TBE0 894 aaKnown RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 MAP9Q49MG5 647 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 MCTP2Q6DN12 878 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 KANK3Q6NY19 840 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 SHC4Q6S5L8 630 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC129Q6ZRS4 1044 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 TOGARAM2Q6ZUX3 1019 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 TADA2BQ86TJ2 420 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CTAGE6Q86UF2 777 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 NUTM2AQ8IVF1 878 aaPredicted RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CTAGE4Q8IX94 777 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 TTC5Q8N0Z6 440 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 FBXW7Q969H0 707 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 RPGRIP1Q96KN7 1286 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 MAP3K14Q99558 947 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 RAI14Q9P0K7 980 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 AKAP2Q9Y2D5 859 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC88AQ3V6T2 1871 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 UBR3Q6ZT12 1888 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 LAMB1P07942 1786 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 TARSL2A2RTX5 802 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 CTAGE9A4FU28 777 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 SPDYE16A6NNV3 312 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 POLR3DP05423 398 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 CASP7P55210 303 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 KCNC4Q03721 635 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 NEXNQ0ZGT2 675 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 MORC3Q14149 939 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 GCKRQ14397 625 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 MCM6Q14566 821 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 ZNF662Q6ZS27 426 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 TOM1L2Q6ZVM7 507 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC91Q7Z6B0 441 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 METTL16Q86W50 562 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 TMTC1Q8IUR5 882 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 FOXP4Q8IVH2 680 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 MB21D2Q8IYB1 491 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 FAM177A1Q8N128 213 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 CNNM3Q8NE01 707 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PLBD2Q8NHP8 589 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 SPATA20Q8TB22 786 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 AFAP1L1Q8TED9 768 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 XAGE3Q8WTP9 111 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 WNT2BQ93097 391 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 EDC3Q96F86 508 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 CTAGE1Q96RT6 745 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PNKPQ96T60 521 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 NAPGQ99747 312 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 TACO1Q9BSH4 297 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 MRPL44Q9H9J2 332 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 NCOA5Q9HCD5 579 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 MAN1B1Q9UKM7 699 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 VPS9D1Q9Y2B5 631 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PCDHGA4Q9Y5G9 962 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 PCDHA5Q9Y5H7 936 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 V9GY48 417 aaPredicted RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 BRWD3Q6RI45 1802 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 MROH7-TTC4A0A0A0MT08 1334 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 ATXN2Q99700 1313 aaKnown RBP4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 DLEC1Q9Y238 1755 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 MYH6P13533 1939 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 FAM181BA6NEQ2 426 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 NBPF26B4DH59 902 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 KIF28PB7ZC32 967 aa4.73□□□□□ -1.65
PTP4A1-205ENST00000626021 RNF113AO15541 343 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms