RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 PNMA3Q9UL41 463 aa10.98□□□□□ -0.65
NELFE-214ENST00000625905 SLC45A1Q9Y2W3 748 aa10.98□□□□□ -0.65
NELFE-214ENST00000625905 GREB1LQ9C091 1923 aaPredicted RBP10.97□□□□□ -0.65
NELFE-214ENST00000625905 CASP8AP2Q9UKL3 1982 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 C19orf81C9J6K1 198 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 FKTNO75072 461 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 PDE4BQ07343 736 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.65
NELFE-214ENST00000625905 DGKZQ13574 1117 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 ZYXQ15942 572 aaKnown RBP10.97□□□□□ -0.65
NELFE-214ENST00000625905 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 TREML2Q5T2D2 321 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 COL13A1Q5TAT6 717 aaPredicted RBP10.97□□□□□ -0.65
NELFE-214ENST00000625905 GPAT2Q6NUI2 795 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 CLEC10AQ8IUN9 316 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
NELFE-214ENST00000625905 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 SH2D4AQ9H788 454 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 PPP4R2Q9NY27 417 aa10.97□□□□□ -0.65
NELFE-214ENST00000625905 PLIN4Q96Q06 1357 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 ADGRA2Q96PE1 1338 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 TLR2O60603 784 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 PRDM1O75626 825 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 CYP2C8P10632 490 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 RASA1P20936 1047 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 CHMLP26374 656 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 USP14P54578 494 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 ALX1Q15699 326 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 BMP2KLQ5H9B9 411 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 ZNF444Q8N0Y2 327 aaPredicted RBP10.96□□□□□ -0.65
NELFE-214ENST00000625905 ACER1Q8TDN7 264 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 KIAA1683Q9H0B3 1180 aa10.96□□□□□ -0.65
NELFE-214ENST00000625905 FGAP02671 866 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 OSBPP22059 807 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 HAND2P61296 217 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 IRX3P78415 501 aaPredicted RBP10.95□□□□□ -0.66
NELFE-214ENST00000625905 ATP2B2Q01814 1243 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 CTDSPL2Q05D32 466 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 TNS4Q8IZW8 715 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 ERO1AQ96HE7 468 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 DSCC1Q9BVC3 393 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 IL25Q9H293 177 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 TOMM22Q9NS69 142 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 CPA4Q9UI42 421 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 ANAPC4Q9UJX5 808 aa10.95□□□□□ -0.66
NELFE-214ENST00000625905 TSPY3P0CV98 308 aa10.94□□□□□ -0.66
NELFE-214ENST00000625905 TSPY8P0CW00 308 aa10.94□□□□□ -0.66
NELFE-214ENST00000625905 VCAM1P19320 739 aa10.94□□□□□ -0.66
NELFE-214ENST00000625905 SP3Q02447 781 aa10.94□□□□□ -0.66
NELFE-214ENST00000625905 CTU1Q7Z7A3 348 aaKnown RBP10.94□□□□□ -0.66
NELFE-214ENST00000625905 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
NELFE-214ENST00000625905 EMILIN3Q9NT22 766 aa10.94□□□□□ -0.66
NELFE-214ENST00000625905 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
NELFE-214ENST00000625905 A0A1W2PRG0 241 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 TSPY2A6NKD2 308 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 SGSM2O43147 1006 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 ORC4O43929 436 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 PCP11498 1178 aaKnown RBP10.93□□□□□ -0.66
NELFE-214ENST00000625905 EEF2P13639 858 aaKnown RBP10.93□□□□□ -0.66
NELFE-214ENST00000625905 IMMTQ16891 758 aaKnown RBP10.93□□□□□ -0.66
NELFE-214ENST00000625905 FAM47AQ5JRC9 791 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 RRP12Q5JTH9 1297 aaKnown RBP10.93□□□□□ -0.66
NELFE-214ENST00000625905 CASC1Q6TDU7 716 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 C17orf99Q6UX52 265 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 TBC1D10CQ8IV04 446 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 CD99L2Q8TCZ2 262 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 LPAR1Q92633 364 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
NELFE-214ENST00000625905 RNF41Q9H4P4 317 aaPredicted RBP10.93□□□□□ -0.66
NELFE-214ENST00000625905 CTNNA3Q9UI47 895 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 TMX2Q9Y320 296 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 ZSWIM8A7E2V4 1837 aa10.93□□□□□ -0.66
NELFE-214ENST00000625905 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 ZNF213O14771 459 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 RAD21O60216 631 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 RANBP6O60518 1105 aaKnown RBP10.92□□□□□ -0.66
NELFE-214ENST00000625905 HOXA7P31268 230 aaPredicted RBP10.92□□□□□ -0.66
NELFE-214ENST00000625905 GCLCP48506 637 aaPredicted RBP10.92□□□□□ -0.66
NELFE-214ENST00000625905 LACTBP83111 547 aaPredicted RBP10.92□□□□□ -0.66
NELFE-214ENST00000625905 TFAP4Q01664 338 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 KIF22Q14807 665 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 SPICE1Q8N0Z3 855 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 ANKRD13CQ8N6S4 541 aa10.92□□□□□ -0.66
NELFE-214ENST00000625905 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms