RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 TMEM47Q9BQJ4 181 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 PSMD14O00487 310 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 ENTPD3O75355 529 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 PTGER2P43116 358 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 RBM5P52756 815 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 AKAP17AQ02040 695 aaKnown RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 CFAP100Q494V2 611 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 MYSM1Q5VVJ2 828 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 CMTR1Q8N1G2 835 aaKnown RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 SRBD1Q8N5C6 995 aaKnown RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 PRMT6Q96LA8 375 aaPredicted RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 USP28Q96RU2 1077 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 FAM198AQ9UFP1 575 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 ZNF646O15015 1829 aaPredicted RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 PLIN4Q96Q06 1357 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 MYH1P12882 1939 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 IGKV6D-41A0A0C4DH26 115 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 MMP1P03956 469 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 GRM4Q14833 912 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 CCDC82Q8N4S0 544 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 MTMR14Q8NCE2 650 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 CCDC17Q96LX7 622 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 LZTS2Q9BRK4 669 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
CCDC163-201ENST00000625766 PCDHAC2Q9Y5I4 1007 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
CCDC163-201ENST00000625766 PLEKHA8P1O95397 391 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
CCDC163-201ENST00000625766 XBP1P17861 261 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 SMARCA1P28370 1054 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 NIM1KQ8IY84 436 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 TAOK3Q9H2K8 898 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 FOXP1Q9H334 677 aaPredicted RBP13.59□□□□□ -0.23
CCDC163-201ENST00000625766 HDAC9Q9UKV0 1011 aa13.59□□□□□ -0.23
CCDC163-201ENST00000625766 PALM3A6NDB9 673 aaPredicted RBP13.58□□□□□ -0.24
CCDC163-201ENST00000625766 RAD17O75943 681 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 SHMT1P34896 483 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 NASPP49321 788 aaPredicted RBP13.58□□□□□ -0.24
CCDC163-201ENST00000625766 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC163-201ENST00000625766 L1TD1Q5T7N2 865 aaKnown RBP13.58□□□□□ -0.24
CCDC163-201ENST00000625766 GAS2L3Q86XJ1 694 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 MAD2L2Q9UI95 211 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 STX8Q9UNK0 236 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 LTBP3Q9NS15 1303 aa13.58□□□□□ -0.24
CCDC163-201ENST00000625766 GOLGA6L4A6NEF3 574 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 YEATS4O95619 227 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 SH3BP5LQ7L8J4 393 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 LINC00301Q8NCQ3 95 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 CXCL9Q07325 125 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 CCDC183Q5T5S1 534 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 FKBP1CQ5VVH2 108 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 TDRD3Q9H7E2 651 aaKnown RBP13.57□□□□□ -0.24
CCDC163-201ENST00000625766 ATRNL1Q5VV63 1379 aa13.57□□□□□ -0.24
CCDC163-201ENST00000625766 CNTNAP5Q8WYK1 1306 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 DDTLA6NHG4 134 aaPredicted RBP13.56□□□□□ -0.24
CCDC163-201ENST00000625766 AKR1B1P15121 316 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 MRE11P49959 708 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 PFKFB3Q16875 520 aaPredicted RBP13.56□□□□□ -0.24
CCDC163-201ENST00000625766 LRSAM1Q6UWE0 723 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 FAM177A1Q8N128 213 aaPredicted RBP13.56□□□□□ -0.24
CCDC163-201ENST00000625766 JDP2Q8WYK2 163 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 PHF20Q9BVI0 1012 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 PSME4Q14997 1843 aa13.56□□□□□ -0.24
CCDC163-201ENST00000625766 BTBD18B2RXH4 712 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 NFKBIEO00221 500 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 SLC39A14Q15043 492 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 DLGAP5Q15398 846 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 ANO1Q5XXA6 986 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 DIS3L2Q8IYB7 885 aaKnown RBP13.55□□□□□ -0.24
CCDC163-201ENST00000625766 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 ZBED3Q96IU2 234 aaPredicted RBP13.55□□□□□ -0.24
CCDC163-201ENST00000625766 SH3GLB2Q9NR46 395 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
CCDC163-201ENST00000625766 COL4A5P29400 1685 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 CACNB3P54284 484 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
CCDC163-201ENST00000625766 TNIP1Q15025 636 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 ADALQ6DHV7 355 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 CIAPIN1Q6FI81 312 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 MKL1Q969V6 931 aa13.55□□□□□ -0.24
CCDC163-201ENST00000625766 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms