RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 TMEM88BA6NKF7 163 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 GOLGA8BA8MQT2 603 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 SLC34A2O95436 690 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 SYT1P21579 422 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 CATIPQ7Z7H3 387 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 MKL1Q969V6 931 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00963-220ENST00000625171 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-220ENST00000625171 SENP2Q9HC62 589 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
LINC00963-220ENST00000625171 WBP1LQ9NX94 342 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 ZDHHC9Q9Y397 364 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 SCN4AP35499 1836 aa13.74□□□□□ -0.21
LINC00963-220ENST00000625171 STX6O43752 255 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 CCT2P78371 535 aaKnown RBP13.73□□□□□ -0.21
LINC00963-220ENST00000625171 STK3Q13188 491 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 SLC44A5Q8NCS7 719 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 ZKSCAN3Q9BRR0 538 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 DNAJC18Q9H819 358 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 MTMR4Q9NYA4 1195 aa13.73□□□□□ -0.21
LINC00963-220ENST00000625171 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 CPLX1O14810 134 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 ITGBL1O95965 494 aaPredicted RBP13.72□□□□□ -0.21
LINC00963-220ENST00000625171 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
LINC00963-220ENST00000625171 FDPSP14324 419 aaKnown RBP13.72□□□□□ -0.21
LINC00963-220ENST00000625171 CDC27P30260 824 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 VEGFBP49765 207 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 CACNB3P54284 484 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
LINC00963-220ENST00000625171 FAM177A1Q8N128 213 aaPredicted RBP13.72□□□□□ -0.21
LINC00963-220ENST00000625171 NYAP2Q9P242 653 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 PPP2R3BQ9Y5P8 575 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 ADAMTSL1Q8N6G6 1762 aa13.72□□□□□ -0.21
LINC00963-220ENST00000625171 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 KIF5BP33176 963 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.21
LINC00963-220ENST00000625171 GNAQP50148 359 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 TCP10Q12799 353 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 RTN1Q16799 776 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 KIF4BQ2VIQ3 1234 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
LINC00963-220ENST00000625171 STK11IPQ8N1F8 1099 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 CRACR2BQ8N4Y2 399 aaPredicted RBP13.71□□□□□ -0.21
LINC00963-220ENST00000625171 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
LINC00963-220ENST00000625171 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 CSRNP1Q96S65 589 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 LZTS2Q9BRK4 669 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.21
LINC00963-220ENST00000625171 KAT14Q9H8E8 782 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 NCOA5Q9HCD5 579 aaKnown RBP13.71□□□□□ -0.21
LINC00963-220ENST00000625171 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
LINC00963-220ENST00000625171 MTMR6Q9Y217 621 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 GJA3Q9Y6H8 435 aa13.71□□□□□ -0.21
LINC00963-220ENST00000625171 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 NMT2O60551 498 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 FMNL1O95466 1100 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-220ENST00000625171 TTLL1O95922 423 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 SNHG28P0DPA3 235 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 ZSCAN22P10073 491 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-220ENST00000625171 FUT2Q10981 343 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 CERKLQ49MI3 558 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-220ENST00000625171 TMEM179Q6ZVK1 233 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 NBPF11Q86T75 865 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 APOBEC3FQ8IUX4 373 aaKnown RBP13.7□□□□□ -0.22
LINC00963-220ENST00000625171 ZSCAN29Q8IWY8 852 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-220ENST00000625171 PNMA1Q8ND90 353 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 WASF1Q92558 559 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 TEPSINQ96N21 525 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 HACL1Q9UJ83 578 aa13.7□□□□□ -0.22
LINC00963-220ENST00000625171 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-220ENST00000625171 SIPA1L1O43166 1804 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
LINC00963-220ENST00000625171 TCP10L2B9ZVM9 353 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 PRPF3O43395 683 aaKnown RBP13.69□□□□□ -0.22
LINC00963-220ENST00000625171 JAK2O60674 1132 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 AKR1B1P15121 316 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 MAP2K1Q02750 393 aaPredicted RBP13.69□□□□□ -0.22
LINC00963-220ENST00000625171 RASA3Q14644 834 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 GRM4Q14833 912 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 SAMD7Q7Z3H4 446 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 CTCFLQ8NI51 663 aaPredicted RBP13.69□□□□□ -0.22
LINC00963-220ENST00000625171 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
LINC00963-220ENST00000625171 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms