RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
ATRX-214ENST00000624166 IFIH1Q9BYX4 1025 aaKnown RBP13.21□□□□□ -0.29
ATRX-214ENST00000624166 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
ATRX-214ENST00000624166 PXDNLA1KZ92 1463 aa13.21□□□□□ -0.3
ATRX-214ENST00000624166 MAGEB6P1A0A0J9YX57 407 aa13.21□□□□□ -0.3
ATRX-214ENST00000624166 EIF3CLB5ME19 914 aaKnown RBP13.21□□□□□ -0.3
ATRX-214ENST00000624166 GYS2P54840 703 aa13.21□□□□□ -0.3
ATRX-214ENST00000624166 CNNM4Q6P4Q7 775 aa13.21□□□□□ -0.3
ATRX-214ENST00000624166 APOA5Q6Q788 366 aa13.21□□□□□ -0.3
ATRX-214ENST00000624166 SRLQ86TD4 932 aa13.21□□□□□ -0.3
ATRX-214ENST00000624166 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.3
ATRX-214ENST00000624166 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 SEMA3EO15041 775 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 PDE4DQ08499 809 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 TCERG1LQ5VWI1 586 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 MMS22LQ6ZRQ5 1243 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
ATRX-214ENST00000624166 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
ATRX-214ENST00000624166 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
ATRX-214ENST00000624166 RESP18Q5W5W9 173 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 KIF4AO95239 1232 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 CETN2P41208 172 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 SAMSN1Q9NSI8 373 aaKnown RBP13.2□□□□□ -0.3
ATRX-214ENST00000624166 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
ATRX-214ENST00000624166 PTPN12Q05209 780 aaKnown RBP13.19□□□□□ -0.3
ATRX-214ENST00000624166 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 TADA2BQ86TJ2 420 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 TMEM2Q9UHN6 1383 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 NAA25Q14CX7 972 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 UBLCP1Q8WVY7 318 aaPredicted RBP13.19□□□□□ -0.3
ATRX-214ENST00000624166 ZNF532Q9HCE3 1301 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 ZBTB22O15209 634 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 MFAP3LO75121 409 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 VWA3BQ502W6 1294 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 STAMQ92783 540 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 NUCKS1Q9H1E3 243 aaKnown RBP13.19□□□□□ -0.3
ATRX-214ENST00000624166 FEZ2Q9UHY8 353 aaPredicted RBP13.19□□□□□ -0.3
ATRX-214ENST00000624166 PLEKHG1Q9ULL1 1385 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 CEP85LQ5SZL2 805 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 CROCCP2Q86T23 111 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 ZCRB1Q8TBF4 217 aaKnown RBP13.19□□□□□ -0.3
ATRX-214ENST00000624166 BLZF1Q9H2G9 400 aa13.19□□□□□ -0.3
ATRX-214ENST00000624166 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 E7EVH7 732 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 EPHB4P54760 987 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 SELENOSQ9BQE4 189 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 CIAO1O76071 339 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 CLNS1AP54105 237 aaKnown RBP13.18□□□□□ -0.3
ATRX-214ENST00000624166 ATP2B2Q01814 1243 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
ATRX-214ENST00000624166 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 ACRBPQ8NEB7 543 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 ARMT1Q9H993 441 aa13.18□□□□□ -0.3
ATRX-214ENST00000624166 CETN1Q12798 172 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 SV2BQ7L1I2 683 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
ATRX-214ENST00000624166 MIGA1Q8NAN2 632 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 FANCBQ8NB91 859 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 UBA5Q9GZZ9 404 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 ADGRG1Q9Y653 693 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 IRS4O14654 1257 aaPredicted RBP13.17□□□□□ -0.3
ATRX-214ENST00000624166 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
ATRX-214ENST00000624166 GNA11P29992 359 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 ARID5AQ03989 594 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
ATRX-214ENST00000624166 PLVAPQ9BX97 442 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 CSRNP2Q9H175 543 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 VPS54Q9P1Q0 977 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 MTRF1LQ9UGC7 380 aaKnown RBP13.17□□□□□ -0.3
ATRX-214ENST00000624166 SRPRBQ9Y5M8 271 aaKnown RBP13.17□□□□□ -0.3
ATRX-214ENST00000624166 KCNA6P17658 529 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
ATRX-214ENST00000624166 NAPAP54920 295 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 WDR24Q96S15 920 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 MYOM1P52179 1685 aa13.17□□□□□ -0.3
ATRX-214ENST00000624166 IFNAR1P17181 557 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms