RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 AKR1B1P15121 316 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 OSBPP22059 807 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 USP14P54578 494 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 ARHGEF6Q15052 776 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 SH3D19Q5HYK7 790 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 TTC22Q5TAA0 569 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 TRIM17Q9Y577 477 aa16.67■□□□□ 0.26
PCDHGC3-208ENST00000622836 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 GUCY1A2P33402 732 aa16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
PCDHGC3-208ENST00000622836 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 ICA1Q05084 483 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 PPARAQ07869 468 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 C17orf99Q6UX52 265 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 ACER1Q8TDN7 264 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 ABHD8Q96I13 439 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 EFCC1Q9HA90 598 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 ARHGEF10LQ9HCE6 1279 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
PCDHGC3-208ENST00000622836 LOC285556D6RIA3 1793 aa16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 GSPT1P15170 499 aaKnown RBP16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 PDE4BQ07343 736 aa16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 IFFO2Q5TF58 517 aa16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 ZNF589Q86UQ0 364 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 KIAA1683Q9H0B3 1180 aa16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
PCDHGC3-208ENST00000622836 PRDM1O75626 825 aa16.63■□□□□ 0.25
PCDHGC3-208ENST00000622836 LACTBP83111 547 aaPredicted RBP16.63■□□□□ 0.25
PCDHGC3-208ENST00000622836 OTOP1Q7RTM1 612 aa16.63■□□□□ 0.25
PCDHGC3-208ENST00000622836 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
PCDHGC3-208ENST00000622836 ASCC2Q9H1I8 757 aaPredicted RBP16.63■□□□□ 0.25
PCDHGC3-208ENST00000622836 EMILIN3Q9NT22 766 aa16.63■□□□□ 0.25
PCDHGC3-208ENST00000622836 ADGRA2Q96PE1 1338 aa16.63■□□□□ 0.25
PCDHGC3-208ENST00000622836 CCDC85CA6NKD9 419 aa16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 RAD21O60216 631 aa16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 FMNL1O95466 1100 aaPredicted RBP16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 RASA1P20936 1047 aa16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 ANKRD13CQ8N6S4 541 aa16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
PCDHGC3-208ENST00000622836 A0A1W2PRG0 241 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 FOXP2O15409 715 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 TSPY3P0CV98 308 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 TSPY8P0CW00 308 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 BCRP11274 1271 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 VCAM1P19320 739 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 HOXA7P31268 230 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 PSMC4P43686 418 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 GCLCP48506 637 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 C12orf42Q96LP6 360 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 ARHGAP39Q9C0H5 1083 aa16.61■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 FGAP02671 866 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 FCGRTP55899 365 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 ALX1Q15699 326 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 P2RX7Q99572 595 aaKnown RBP16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 RPAP3Q9H6T3 665 aaPredicted RBP16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
PCDHGC3-208ENST00000622836 GNRH1P01148 92 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 HOXD10P28358 340 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 HERVK_113P62684 666 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 TANGO6Q9C0B7 1094 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 PTPN22Q9Y2R2 807 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 TMX2Q9Y320 296 aa16.59■□□□□ 0.25
PCDHGC3-208ENST00000622836 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
PCDHGC3-208ENST00000622836 HAND2P61296 217 aa16.58■□□□□ 0.24
PCDHGC3-208ENST00000622836 CAP1Q01518 475 aa16.58■□□□□ 0.24
PCDHGC3-208ENST00000622836 TFAP4Q01664 338 aa16.58■□□□□ 0.24
PCDHGC3-208ENST00000622836 GTF3C2Q8WUA4 911 aaPredicted RBP16.58■□□□□ 0.24
PCDHGC3-208ENST00000622836 LPAR1Q92633 364 aa16.58■□□□□ 0.24
PCDHGC3-208ENST00000622836 ZMYM6O95789 1325 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 TNPO2O14787 897 aaKnown RBP16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
PCDHGC3-208ENST00000622836 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms