RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 AKR1B1P15121 316 aa23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 TFAP4Q01664 338 aa23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 COL9A3Q14050 684 aaPredicted RBP23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 BLOC1S2Q6QNY1 142 aa23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 NEDD1Q8NHV4 660 aa23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 BEGAINQ9BUH8 593 aa23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 PICK1Q9NRD5 415 aa23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 GINM1Q9NU53 330 aa23.39■■□□□ 1.34
PDLIM2-221ENST00000622702 DOCK1Q14185 1865 aa23.39■■□□□ 1.33
PDLIM2-221ENST00000622702 TSPY3P0CV98 308 aa23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 TSPY8P0CW00 308 aa23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 CASTP20810 708 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 MCM5P33992 734 aa23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 ABCB5Q2M3G0 1257 aa23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 FAM47AQ5JRC9 791 aa23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 CYB5R4Q7L1T6 521 aa23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 DHX32Q7L7V1 743 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 WDR19Q8NEZ3 1342 aa23.38■■□□□ 1.33
PDLIM2-221ENST00000622702 MANSC4A6NHS7 340 aaPredicted RBP23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 GDF11O95390 407 aa23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 PPATQ06203 517 aa23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 SREBF2Q12772 1141 aa23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 TMEM179Q6ZVK1 233 aa23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 MTA3Q9BTC8 594 aa23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 TCP11L1Q9NUJ3 509 aa23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 ATAD5Q96QE3 1844 aa23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 GREB1LQ9C091 1923 aaPredicted RBP23.37■■□□□ 1.33
PDLIM2-221ENST00000622702 ASNSP08243 561 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 TM4SF4P48230 202 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 ANTXR2P58335 489 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 JAG1P78504 1218 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 EXOSC10Q01780 885 aaKnown RBP23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 PPIL2Q13356 520 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 RUFY3Q7L099 469 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 CABP5Q9NP86 173 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 ZBTB21Q9ULJ3 1066 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 CYP46A1Q9Y6A2 500 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 IGKV6D-41A0A0C4DH26 115 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 MPHOSPH10O00566 681 aaKnown RBP23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 IRF6O14896 467 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 GH2P01242 217 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 RPS6KB1P23443 525 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 IQCA1Q86XH1 822 aa23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 UPF3BQ9BZI7 483 aaKnown RBP23.36■■□□□ 1.33
PDLIM2-221ENST00000622702 PRC1O43663 620 aa23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 PTPRAP18433 802 aa23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 GUCY1A2P33402 732 aa23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 INHBEP58166 350 aa23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 RABEP1Q15276 862 aa23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 SHROOM1Q2M3G4 852 aaPredicted RBP23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 ZHX2Q9Y6X8 837 aa23.35■■□□□ 1.33
PDLIM2-221ENST00000622702 FOXN1O15353 648 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 CPA1P15085 419 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 GTF2A2P52657 109 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 CCDC178Q5BJE1 867 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 IL27Q8NEV9 243 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 MS4A4AQ96JQ5 239 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 TMEM87BQ96K49 555 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 UBAC1Q9BSL1 405 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 IL17RBQ9NRM6 502 aa23.34■■□□□ 1.33
PDLIM2-221ENST00000622702 NOVP48745 357 aa23.33■■□□□ 1.33
PDLIM2-221ENST00000622702 SEPT2Q15019 361 aa23.33■■□□□ 1.33
PDLIM2-221ENST00000622702 PPP4R3BQ5MIZ7 849 aa23.33■■□□□ 1.33
PDLIM2-221ENST00000622702 CHST3Q7LGC8 479 aa23.33■■□□□ 1.33
PDLIM2-221ENST00000622702 CCDC84Q86UT8 332 aaPredicted RBP23.33■■□□□ 1.33
PDLIM2-221ENST00000622702 ZSCAN10Q96SZ4 725 aaPredicted RBP23.33■■□□□ 1.33
PDLIM2-221ENST00000622702 KANSL2Q9H9L4 492 aa23.33■■□□□ 1.33
PDLIM2-221ENST00000622702 SNAPC2Q13487 334 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 SART3Q15020 963 aaKnown RBP23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 FBXL16Q8N461 479 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 IGDCC4Q8TDY8 1250 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 CEP95Q96GE4 821 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 RNF186Q9NXI6 227 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 MTMR4Q9NYA4 1195 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 PHIPQ8WWQ0 1821 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 TNKSO95271 1327 aa23.32■■□□□ 1.32
PDLIM2-221ENST00000622702 CCL15-CCL14A0A0B4J2E2 113 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 TESPA1A2RU30 521 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 IFIT3O14879 490 aaKnown RBP23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 CA12O43570 354 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 NMT2O60551 498 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 TRPA1O75762 1119 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 SEC23AQ15436 765 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 CCL15Q16663 113 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 DGKHQ86XP1 1220 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 ANKS1AQ92625 1134 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 TCEANC2Q96MN5 208 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 TTC14Q96N46 770 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 ZKSCAN3Q9BRR0 538 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 AFG3L2Q9Y4W6 797 aa23.31■■□□□ 1.32
PDLIM2-221ENST00000622702 CETPP11597 493 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 NEK4P51957 841 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 RCSD1Q6JBY9 416 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 IFNL1Q8IU54 200 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 ENAHQ8N8S7 591 aaPredicted RBP23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 BRI3BPQ8WY22 251 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 AGXT2Q9BYV1 514 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms