RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ARHGAP23Q9P227 1491 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 IFNAR1P17181 557 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 GNA11P29992 359 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 CDC25BP30305 580 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 TBC1D8BQ0IIM8 1120 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 PTGDRQ13258 359 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 NAA30Q147X3 362 aaPredicted RBP14.49□□□□□ -0.09
MSH6-215ENST00000622629 SYCP1Q15431 976 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 TAF3Q5VWG9 929 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 SMYD4Q8IYR2 804 aaPredicted RBP14.49□□□□□ -0.09
MSH6-215ENST00000622629 CEP112Q8N8E3 955 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 UTYO14607 1347 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSH6-215ENST00000622629 UIMC1Q96RL1 719 aa14.49□□□□□ -0.09
MSH6-215ENST00000622629 GTPBP4Q9BZE4 634 aaKnown RBP14.49□□□□□ -0.09
MSH6-215ENST00000622629 TGFBRAP1Q8WUH2 860 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 KCNF1Q9H3M0 494 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 PCDHB6Q9Y5E3 794 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 PDE4DQ08499 809 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 CCDC122Q5T0U0 273 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 TNS3Q68CZ2 1445 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 FMNL1O95466 1100 aaPredicted RBP14.48□□□□□ -0.09
MSH6-215ENST00000622629 HLA-DOAP06340 250 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 PARP1P09874 1014 aaKnown RBP14.48□□□□□ -0.09
MSH6-215ENST00000622629 CDC27P30260 824 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 KIF5AQ12840 1032 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 GPKOWQ92917 476 aaPredicted RBP eCLIP14.48□□□□□ -0.091e-10■■□□□ 11.7
MSH6-215ENST00000622629 PPP1R13BQ96KQ4 1090 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 SLF1Q9BQI6 1058 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 CDCA7Q9BWT1 371 aaPredicted RBP14.48□□□□□ -0.09
MSH6-215ENST00000622629 CCNL1Q9UK58 526 aaPredicted RBP14.48□□□□□ -0.09
MSH6-215ENST00000622629 SLIT1O75093 1534 aa14.48□□□□□ -0.09
MSH6-215ENST00000622629 KRT86O43790 486 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 ARID4AP29374 1257 aaPredicted RBP14.47□□□□□ -0.09
MSH6-215ENST00000622629 TXKP42681 527 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 KRT79Q5XKE5 535 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 CSGALNACT2Q8N6G5 542 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 SYMPKQ92797 1274 aaKnown RBP14.47□□□□□ -0.09
MSH6-215ENST00000622629 CALCOCO1Q9P1Z2 691 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 PPP2R2CQ9Y2T4 447 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 GOLGA6L10A6NI86 522 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 UFL1O94874 794 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 CDC25AP30304 524 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 NOP2P46087 812 aaKnown RBP14.47□□□□□ -0.09
MSH6-215ENST00000622629 ST5P78524 1137 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 PLA2G4DQ86XP0 818 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 ALS2CR12Q96Q35 445 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 CCNT1O60563 726 aaKnown RBP14.47□□□□□ -0.09
MSH6-215ENST00000622629 MMP1P03956 469 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 LIFRP42702 1097 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 TSPYL1Q9H0U9 437 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 GPCPD1Q9NPB8 672 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 NEDD4P46934 1319 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 CDR1P51861 262 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 CNBD1Q8NA66 436 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 NELFBQ8WX92 580 aa14.47□□□□□ -0.09
MSH6-215ENST00000622629 ZC3H12CQ9C0D7 883 aaKnown RBP14.47□□□□□ -0.09
MSH6-215ENST00000622629 EHBP1Q8NDI1 1231 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 ZNF622Q969S3 477 aaKnown RBP eCLIP14.46□□□□□ -0.097e-14■■■□□ 18.5
MSH6-215ENST00000622629 TIGD1Q96MW7 591 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 FOXP1Q9H334 677 aaPredicted RBP14.46□□□□□ -0.09
MSH6-215ENST00000622629 MACROD2A1Z1Q3 448 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 KIF28PB7ZC32 967 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 IKBKBO14920 756 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 WDHD1O75717 1129 aaPredicted RBP14.46□□□□□ -0.09
MSH6-215ENST00000622629 CTDNEP1O95476 244 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 CHMP4BP1P59074 171 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 KRT83P78385 493 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 TMOD2Q9NZR1 351 aa14.46□□□□□ -0.09
MSH6-215ENST00000622629 USP27XA6NNY8 438 aa14.46□□□□□ -0.1
MSH6-215ENST00000622629 GOLGA8HP0CJ92 632 aa14.46□□□□□ -0.1
MSH6-215ENST00000622629 ST3GAL1Q11201 340 aa14.46□□□□□ -0.1
MSH6-215ENST00000622629 ODF2Q5BJF6 829 aa14.46□□□□□ -0.1
MSH6-215ENST00000622629 PNMA1Q8ND90 353 aa14.46□□□□□ -0.1
MSH6-215ENST00000622629 SAMSN1Q9NSI8 373 aaKnown RBP14.46□□□□□ -0.1
MSH6-215ENST00000622629 KIF20AO95235 890 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 SETQ01105 290 aaPredicted RBP14.45□□□□□ -0.1
MSH6-215ENST00000622629 CTR9Q6PD62 1173 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 SARM1Q6SZW1 724 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 RFX7Q2KHR2 1363 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 PSDA5PKW4 1024 aaPredicted RBP14.45□□□□□ -0.1
MSH6-215ENST00000622629 SCG2P13521 617 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 MCM3P25205 808 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 PLCD1P51178 756 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 TRAPPC3LQ5T215 181 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 WDR66Q8TBY9 1149 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 RASGRP4Q8TDF6 673 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 EPSTI1Q96J88 318 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 SPAG5Q96R06 1193 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
MSH6-215ENST00000622629 SPTLC3Q9NUV7 552 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 IFT172Q9UG01 1749 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 BICDL2A1A5D9 508 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 TMCO5BA8MYB1 307 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
MSH6-215ENST00000622629 INF2Q27J81 1249 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 KCNB2Q92953 911 aa14.45□□□□□ -0.1
MSH6-215ENST00000622629 RNF26Q9BY78 433 aaPredicted RBP14.45□□□□□ -0.1
MSH6-215ENST00000622629 SOS2Q07890 1332 aaPredicted RBP14.45□□□□□ -0.1
MSH6-215ENST00000622629 HLTFQ14527 1009 aaKnown RBP eCLIP14.45□□□□□ -0.12e-7■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms