RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
PDPN-212ENST00000621990 KCNQ4P56696 695 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
PDPN-212ENST00000621990 PDE4BQ07343 736 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 PTPN14Q15678 1187 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 SPECC1Q5M775 1068 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 BICDL1Q6ZP65 573 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 PTF1AQ7RTS3 328 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 MLKLQ8NB16 471 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 TMX1Q9H3N1 280 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 VPS54Q9P1Q0 977 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 ZNF18P17022 549 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 GLIPR1L2Q4G1C9 344 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 EARS2Q5JPH6 523 aaKnown RBP10.8□□□□□ -0.68
PDPN-212ENST00000621990 CT47A1Q5JQC4 288 aaPredicted RBP10.8□□□□□ -0.68
PDPN-212ENST00000621990 TPTE2Q6XPS3 522 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 VSTM4Q8IW00 320 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 FERMT2Q96AC1 680 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 CSRNP2Q9H175 543 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 SRP68Q9UHB9 627 aaKnown RBP10.8□□□□□ -0.68
PDPN-212ENST00000621990 SERTAD1Q9UHV2 236 aa10.8□□□□□ -0.68
PDPN-212ENST00000621990 V9GY48 417 aaPredicted RBP10.8□□□□□ -0.68
PDPN-212ENST00000621990 ROBO3Q96MS0 1386 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 PRDM1O75626 825 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 UBASH3AP57075 661 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 SH3RF1Q7Z6J0 888 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
PDPN-212ENST00000621990 CCDC112Q8NEF3 446 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 ENOX1Q8TC92 643 aaKnown RBP10.79□□□□□ -0.68
PDPN-212ENST00000621990 FANCLQ9NW38 375 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 MKRN1Q9UHC7 482 aaKnown RBP10.79□□□□□ -0.68
PDPN-212ENST00000621990 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 ZPR1O75312 459 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 PRR29P0C7W0 189 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 PRDX5P30044 214 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 SRBD1Q8N5C6 995 aaKnown RBP10.79□□□□□ -0.68
PDPN-212ENST00000621990 DPF2Q92785 391 aa10.79□□□□□ -0.68
PDPN-212ENST00000621990 CCDC94Q9BW85 323 aaPredicted RBP10.79□□□□□ -0.68
PDPN-212ENST00000621990 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 TUBB4AP04350 444 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 EVX2Q03828 476 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 NCBP1Q09161 790 aaKnown RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 USP49Q70CQ1 688 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 SMIM5Q71RC9 77 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 ANKS1AQ92625 1134 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 SMARCE1Q969G3 411 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 INTS13Q9NVM9 706 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 TFCP2L1Q9NZI6 479 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 GNPATO15228 680 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 SERPINC1P01008 464 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 SLFN14P0C7P3 912 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 ERCC5P28715 1186 aaPredicted RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 TRAPPC10P48553 1259 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 TBX2Q13207 712 aaPredicted RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 SPTY2D1Q68D10 685 aaPredicted RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 RCSD1Q6JBY9 416 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 TXNRD3Q86VQ6 643 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 AMIGO3Q86WK7 504 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 PPP1R13BQ96KQ4 1090 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 BRMS1Q9HCU9 246 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 NAV1Q8NEY1 1877 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 DDX60LQ5H9U9 1706 aaKnown RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 A0A087X0B3 334 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 TOM1O60784 492 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 ATP2C1P98194 919 aaPredicted RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 FMR1Q06787 632 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDPN-212ENST00000621990 PFKFB3Q16875 520 aaPredicted RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 C15orf52Q6ZUT6 534 aaKnown RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 CTCFLQ8NI51 663 aaPredicted RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 MED15Q96RN5 788 aa10.78□□□□□ -0.68
PDPN-212ENST00000621990 RTCBQ9Y3I0 505 aaKnown RBP10.78□□□□□ -0.68
PDPN-212ENST00000621990 WNT7AO00755 349 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 NRDCO43847 1150 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 NMT2O60551 498 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 SCG2P13521 617 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 PLCD1P51178 756 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
PDPN-212ENST00000621990 CDK5RAP2Q96SN8 1893 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 CYP2D6P10635 497 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 CFAP100Q494V2 611 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 FCHSD1Q86WN1 690 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 DGKHQ86XP1 1220 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 KIF18AQ8NI77 898 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 CCDC34Q96HJ3 373 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 TRMT1Q9NXH9 659 aaKnown RBP10.77□□□□□ -0.69
PDPN-212ENST00000621990 CCNL1Q9UK58 526 aaPredicted RBP10.77□□□□□ -0.69
PDPN-212ENST00000621990 LEMD3Q9Y2U8 911 aa10.77□□□□□ -0.69
PDPN-212ENST00000621990 hCG_1642624A0A1W2PR95 340 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 CCP110O43303 1012 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 TTC38Q5R3I4 469 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 C12orf60Q5U649 245 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 TMEM139Q8IV31 216 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 GRAMD1CQ8IYS0 662 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
PDPN-212ENST00000621990 EPSTI1Q96J88 318 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 L2HGDHQ9H9P8 463 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 SH3GLB2Q9NR46 395 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 NFE2L3Q9Y4A8 694 aa10.76□□□□□ -0.69
PDPN-212ENST00000621990 TMEM232C9JQI7 657 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms