RNA–Protein interactions for RNA: ENST00000621790.4

TARDBP-226, Transcript of TAR DNA binding protein, human

TSL 5 BASIC

Gene TARDBP, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-226	ENST00000621790	CDAN1	Q8IWY9	1227 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	SCYL3	Q8IZE3	742 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	ZNF526	Q8TF50	670 aa	Predicted RBP	13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	CEP95	Q96GE4	821 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	TCEANC2	Q96MN5	208 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	SH2D4A	Q9H788	454 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	KAT14	Q9H8E8	782 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	ARHGEF10L	Q9HCE6	1279 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	DAXX	Q9UER7	740 aa	Predicted RBP	13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	ZBTB21	Q9ULJ3	1066 aa		13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	SCAF8	Q9UPN6	1271 aa	Known RBP	13.65	□□□□□ -0.22
TARDBP-226	ENST00000621790	POLR2A	P24928	1970 aa	Known RBP	13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	CCDC196	A0A1B0GTZ2	297 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	USP2	O75604	605 aa	Predicted RBP	13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	GH2	P01242	217 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	MAP1S	Q66K74	1059 aa	Predicted RBP	13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	RCSD1	Q6JBY9	416 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	APOA5	Q6Q788	366 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	WRNIP1	Q96S55	665 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	ZKSCAN3	Q9BRR0	538 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	LRRC2	Q9BYS8	371 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	SLK	Q9H2G2	1235 aa	Predicted RBP	13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	AS3MT	Q9HBK9	375 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	PICK1	Q9NRD5	415 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	STX8	Q9UNK0	236 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	CSAD	Q9Y600	493 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	MYH8	P13535	1937 aa		13.64	□□□□□ -0.23
TARDBP-226	ENST00000621790	SSC5D	A1L4H1	1573 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	NID2	Q14112	1375 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	KLF18	A0A0U1RQI7	1052 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	USP17L5	A8MUK1	530 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	ZBTB43	O43298	467 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	POTEI	P0CG38	1075 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	POTEJ	P0CG39	1038 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	GUCY1A2	P33402	732 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	ICA1	Q05084	483 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	APOBR	Q0VD83	1088 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	COL9A3	Q14050	684 aa	Predicted RBP	13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	PRAMEF18	Q5VWM3	479 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	ANKRD13A	Q8IZ07	590 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	ZNF654	Q8IZM8	581 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	SMC1B	Q8NDV3	1235 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	NKX2-3	Q8TAU0	364 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	INTS4	Q96HW7	963 aa	Known RBP	13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	TMX3	Q96JJ7	454 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	TPCN1	Q9ULQ1	816 aa		13.63	□□□□□ -0.23
TARDBP-226	ENST00000621790	GREB1L	Q9C091	1923 aa	Predicted RBP	13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	NMT2	O60551	498 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	PFKFB2	O60825	505 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	GDF11	O95390	407 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	CD2BP2	O95400	341 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	PDIA3	P30101	505 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	KIF5B	P33176	963 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	GNAQ	P50148	359 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	RRP1B	Q14684	758 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	SEPT2	Q15019	361 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	RAB3GAP1	Q15042	981 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	CPLX2	Q6PUV4	134 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	PNMA1	Q8ND90	353 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	TMEM47	Q9BQJ4	181 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	WDR18	Q9BV38	432 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	RBM28	Q9NW13	759 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	CLIP2	Q9UDT6	1046 aa		13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.62	□□□□□ -0.23
TARDBP-226	ENST00000621790	GOLGA8B	A8MQT2	603 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	KIF3C	O14782	793 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	TOMM70	O94826	608 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	ITGBL1	O95965	494 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	EEF2	P13639	858 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	YY1	P25490	414 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	TROAP	Q12815	778 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	CUL4A	Q13619	759 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	TTLL12	Q14166	644 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	ME3	Q16798	604 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	C2orf69	Q8N8R5	385 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	GMCL1P1	Q8NEA9	526 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	CTCFL	Q8NI51	663 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	RBM46	Q8TBY0	533 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	IPO9	Q96P70	1041 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	LZTS2	Q9BRK4	669 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	LLPH	Q9BRT6	129 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	BRPF3	Q9ULD4	1205 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	TMX2	Q9Y320	296 aa		13.61	□□□□□ -0.23
TARDBP-226	ENST00000621790	C19orf81	C9J6K1	198 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	CDKL5	O76039	1030 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	HSP90AA1	P07900	732 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	SLURP2	P0DP57	97 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	PDIA4	P13667	645 aa	Known RBP	13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	PTPRA	P18433	802 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	SMARCA1	P28370	1054 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	INPP5B	P32019	993 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	METAP2	P50579	478 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	USP14	P54578	494 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	FSTL1	Q12841	308 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	LDLRAD1	Q5T700	205 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	FANCB	Q8NB91	859 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	GTF3C6	Q969F1	213 aa		13.6	□□□□□ -0.23
TARDBP-226	ENST00000621790	KIAA1683	Q9H0B3	1180 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms