RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ACTN2P35609 894 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 DYNLL1P63167 89 aaKnown RBP12.14□□□□□ -0.47
CDH1-214ENST00000621016 NOSTRINQ8IVI9 506 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 KRI1Q8N9T8 703 aaKnown RBP12.14□□□□□ -0.47
CDH1-214ENST00000621016 PPM1EQ8WY54 764 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 EPSTI1Q96J88 318 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 SAMSN1Q9NSI8 373 aaKnown RBP12.14□□□□□ -0.47
CDH1-214ENST00000621016 GSCP56915 257 aaPredicted RBP12.14□□□□□ -0.47
CDH1-214ENST00000621016 PSMD2Q13200 908 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 MCM6Q14566 821 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 ZNF174Q15697 407 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 NMT2O60551 498 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 TPM1P09493 284 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
CDH1-214ENST00000621016 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 ADGRA1Q86SQ6 560 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 UBXN4Q92575 508 aa12.14□□□□□ -0.47
CDH1-214ENST00000621016 TEX13AQ9BXU3 409 aaPredicted RBP12.14□□□□□ -0.47
CDH1-214ENST00000621016 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
CDH1-214ENST00000621016 BMP6P22004 513 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 GNG11P61952 73 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 PLIN2Q99541 437 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 AP1G2O75843 785 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 EVCP57679 992 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDH1-214ENST00000621016 SNX1Q13596 522 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 PTPAQ15257 358 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 NTRK3Q16288 839 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 LZTFL1Q9NQ48 299 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 CLSTN1O94985 981 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 UQCRFS1P1P0C7P4 283 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 TOB1P50616 345 aaPredicted RBP12.13□□□□□ -0.47
CDH1-214ENST00000621016 N4BP2Q86UW6 1770 aaPredicted RBP12.13□□□□□ -0.47
CDH1-214ENST00000621016 TMEM87BQ96K49 555 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 CSRNP2Q9H175 543 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 BLZF1Q9H2G9 400 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
CDH1-214ENST00000621016 GBP6Q6ZN66 633 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 RASSF8Q8NHQ8 419 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDH1-214ENST00000621016 CARD6Q9BX69 1037 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
CDH1-214ENST00000621016 MTF1Q14872 753 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 POSTNQ15063 836 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 ZNF654Q8IZM8 581 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 CCDC150Q8NCX0 1101 aa12.12□□□□□ -0.47
CDH1-214ENST00000621016 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 PLEKHA8P1O95397 391 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 CHRNDQ07001 517 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
CDH1-214ENST00000621016 EARS2Q5JPH6 523 aaKnown RBP12.11□□□□□ -0.47
CDH1-214ENST00000621016 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 MRC1P22897 1456 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 TNKSO95271 1327 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 CCT6AP40227 531 aaKnown RBP12.11□□□□□ -0.47
CDH1-214ENST00000621016 INHBEP58166 350 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 N4BP2L2Q92802 583 aaPredicted RBP12.11□□□□□ -0.47
CDH1-214ENST00000621016 KAT2BQ92831 832 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
CDH1-214ENST00000621016 MAN1B1Q9UKM7 699 aa12.11□□□□□ -0.47
CDH1-214ENST00000621016 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDH1-214ENST00000621016 EME2A4GXA9 379 aaPredicted RBP12.1□□□□□ -0.47
CDH1-214ENST00000621016 MMP1P03956 469 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 PPARAQ07869 468 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 OSBPL5Q9H0X9 879 aaPredicted RBP12.1□□□□□ -0.47
CDH1-214ENST00000621016 ARGLU1Q9NWB6 273 aaPredicted RBP12.1□□□□□ -0.47
CDH1-214ENST00000621016 SCN11AQ9UI33 1791 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 CPDO75976 1380 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 WNT7AO00755 349 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 KCNQ2O43526 872 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 CUTAO60888 179 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 VEGFAP15692 232 aaPredicted RBP12.1□□□□□ -0.47
CDH1-214ENST00000621016 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
CDH1-214ENST00000621016 CRKLP46109 303 aaKnown RBP12.1□□□□□ -0.47
CDH1-214ENST00000621016 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 TOGARAM2Q6ZUX3 1019 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 KRT23Q9C075 422 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 CENPHQ9H3R5 247 aa12.1□□□□□ -0.47
CDH1-214ENST00000621016 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH1-214ENST00000621016 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 MAGEB6P1A0A0J9YX57 407 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 A0A0U1RQJ8 604 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 H3BQF6 201 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 TEX33O43247 280 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 MCM7P33993 719 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 IFIT1BQ5T764 474 aaKnown RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 WWC2Q6AWC2 1192 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 CRACR2BQ8N4Y2 399 aaPredicted RBP12.09□□□□□ -0.47
CDH1-214ENST00000621016 ATRIPQ8WXE1 791 aa12.09□□□□□ -0.47
CDH1-214ENST00000621016 BAG1Q99933 345 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms