RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
TP53-226ENST00000620739 ARPP21Q9UBL0 812 aaPredicted RBP13.14□□□□□ -0.31
TP53-226ENST00000620739 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
TP53-226ENST00000620739 KRT85P78386 507 aa13.14□□□□□ -0.31
TP53-226ENST00000620739 DNAJC14Q6Y2X3 702 aaPredicted RBP13.14□□□□□ -0.31
TP53-226ENST00000620739 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
TP53-226ENST00000620739 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 TSPY2A6NKD2 308 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 SSR1P43307 286 aaKnown RBP13.13□□□□□ -0.31
TP53-226ENST00000620739 TFAP4Q01664 338 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
TP53-226ENST00000620739 SYNE3Q6ZMZ3 975 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 FANCBQ8NB91 859 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 TMEM87AQ8NBN3 555 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 ALG1Q9BT22 464 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 DPEP1P16444 411 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 KCNA3P22001 575 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
TP53-226ENST00000620739 CACNB3P54284 484 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
TP53-226ENST00000620739 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
TP53-226ENST00000620739 DDX4Q9NQI0 724 aaKnown RBP13.13□□□□□ -0.31
TP53-226ENST00000620739 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
TP53-226ENST00000620739 PPP1R1BQ9UD71 204 aaPredicted RBP13.13□□□□□ -0.31
TP53-226ENST00000620739 FLT1P17948 1338 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 CCDC66A2RUB6 948 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 RTN1Q16799 776 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 CNKSR1Q969H4 720 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 SPATA32Q96LK8 384 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 LRRC37AA6NMS7 1700 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 ECE2O60344 883 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 UBE2HP62256 183 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 PDE4BQ07343 736 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 PIBF1Q8WXW3 757 aa13.12□□□□□ -0.31
TP53-226ENST00000620739 GAKO14976 1311 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 ORC4O43929 436 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 PLEKHA8P1O95397 391 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 GTF2A1P52655 376 aaPredicted RBP13.11□□□□□ -0.31
TP53-226ENST00000620739 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
TP53-226ENST00000620739 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 EYA3Q99504 573 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 KIF3AQ9Y496 699 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 MBD3O95983 291 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 LIG1P18858 919 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 TROAPQ12815 778 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 NFIAQ12857 509 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
TP53-226ENST00000620739 ZSCAN16Q9H4T2 348 aaPredicted RBP13.11□□□□□ -0.31
TP53-226ENST00000620739 KCNJ14Q9UNX9 436 aa13.11□□□□□ -0.31
TP53-226ENST00000620739 YDJCA8MPS7 323 aa13.1□□□□□ -0.31
TP53-226ENST00000620739 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
TP53-226ENST00000620739 KRT40Q6A162 431 aa13.1□□□□□ -0.31
TP53-226ENST00000620739 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
TP53-226ENST00000620739 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
TP53-226ENST00000620739 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
TP53-226ENST00000620739 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
TP53-226ENST00000620739 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
TP53-226ENST00000620739 APOBEC3HQ6NTF7 200 aaKnown RBP13.1□□□□□ -0.31
TP53-226ENST00000620739 RINLQ6ZS11 566 aa13.1□□□□□ -0.31
TP53-226ENST00000620739 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
TP53-226ENST00000620739 SHISA4Q96DD7 197 aa13.1□□□□□ -0.31
TP53-226ENST00000620739 IFNAR1P17181 557 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 RASA1P20936 1047 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 CDK8P49336 464 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
TP53-226ENST00000620739 SSRP1Q08945 709 aaKnown RBP13.09□□□□□ -0.31
TP53-226ENST00000620739 TCP10Q12799 353 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 DACT2Q5SW24 774 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 CDC42EP5Q6NZY7 148 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
TP53-226ENST00000620739 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
TP53-226ENST00000620739 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 CCDC88AQ3V6T2 1871 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 ZNF444Q8N0Y2 327 aaPredicted RBP13.09□□□□□ -0.31
TP53-226ENST00000620739 SCAND2PQ9GZW5 306 aaPredicted RBP13.09□□□□□ -0.31
TP53-226ENST00000620739 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
TP53-226ENST00000620739 CDKL5O76039 1030 aa13.08□□□□□ -0.32
TP53-226ENST00000620739 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
TP53-226ENST00000620739 TSPY3P0CV98 308 aa13.08□□□□□ -0.32
TP53-226ENST00000620739 TSPY8P0CW00 308 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms