RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 SPP2Q13103 211 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 DEFB115Q30KQ5 88 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 ERO1BQ86YB8 467 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 AFG3L2Q9Y4W6 797 aa16.11■□□□□ 0.17
NEK3-210ENST00000620675 BAZ2BQ9UIF8 2168 aaKnown RBP16.11■□□□□ 0.17
NEK3-210ENST00000620675 USP17L5A8MUK1 530 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 EPB41L2O43491 1005 aaKnown RBP16.1■□□□□ 0.17
NEK3-210ENST00000620675 AOC2O75106 756 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 EEF2P13639 858 aaKnown RBP16.1■□□□□ 0.17
NEK3-210ENST00000620675 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 RCSD1Q6JBY9 416 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 NCOA7Q8NI08 942 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 ESR2Q92731 530 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 JAKMIP1Q96N16 626 aaKnown RBP16.1■□□□□ 0.17
NEK3-210ENST00000620675 SLC10A3P09131 477 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
NEK3-210ENST00000620675 ICA1Q05084 483 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 ZYXQ15942 572 aaKnown RBP16.1■□□□□ 0.17
NEK3-210ENST00000620675 KRT23Q9C075 422 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
NEK3-210ENST00000620675 PCP11498 1178 aaKnown RBP16.09■□□□□ 0.17
NEK3-210ENST00000620675 PPATQ06203 517 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
NEK3-210ENST00000620675 CAPNS2Q96L46 248 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 NEK1Q96PY6 1258 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 KIF2CQ99661 725 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 CNNM2Q9H8M5 875 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 LOC285556D6RIA3 1793 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 UNCXA6NJT0 531 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 VEGFBP49765 207 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 TRDNQ13061 729 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 MTMR2Q13614 643 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 LRRC47Q8N1G4 583 aaKnown RBP16.09■□□□□ 0.17
NEK3-210ENST00000620675 ZNF280CQ8ND82 737 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 HHIPL1Q96JK4 782 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 UPF3BQ9BZI7 483 aaKnown RBP16.09■□□□□ 0.17
NEK3-210ENST00000620675 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
NEK3-210ENST00000620675 PARP14Q460N5 1801 aa16.08■□□□□ 0.16
NEK3-210ENST00000620675 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
NEK3-210ENST00000620675 PPIL2Q13356 520 aa16.08■□□□□ 0.16
NEK3-210ENST00000620675 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
NEK3-210ENST00000620675 MS4A4AQ96JQ5 239 aa16.08■□□□□ 0.16
NEK3-210ENST00000620675 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
NEK3-210ENST00000620675 STX8Q9UNK0 236 aa16.08■□□□□ 0.16
NEK3-210ENST00000620675 TNKSO95271 1327 aa16.08■□□□□ 0.16
NEK3-210ENST00000620675 PRC1O43663 620 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 MCCP23508 829 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 HMGCS2P54868 508 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 MOGSQ13724 837 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 SEC23AQ15436 765 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 ZSCAN10Q96SZ4 725 aaPredicted RBP16.07■□□□□ 0.16
NEK3-210ENST00000620675 WDR18Q9BV38 432 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 EXOSC10Q01780 885 aaKnown RBP16.07■□□□□ 0.16
NEK3-210ENST00000620675 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 RLFQ13129 1914 aa16.07■□□□□ 0.16
NEK3-210ENST00000620675 NOVP48745 357 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 SPICE1Q8N0Z3 855 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 IGDCC4Q8TDY8 1250 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 EMILIN3Q9NT22 766 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 MTMR7Q9Y216 660 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 SMCHD1A6NHR9 2005 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
NEK3-210ENST00000620675 USP17L10C9JJH3 530 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 TTLL1O95922 423 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 ZBTB48P10074 688 aaPredicted RBP16.06■□□□□ 0.16
NEK3-210ENST00000620675 MCM5P33992 734 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 RBM25P49756 843 aaKnown RBP16.06■□□□□ 0.16
NEK3-210ENST00000620675 BACE1P56817 501 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 KRT32Q14532 448 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 BRI3BPQ8WY22 251 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 TBC1D32Q96NH3 1257 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 FEZ1Q99689 392 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 PTPN18Q99952 460 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 NYAP2Q9P242 653 aa16.06■□□□□ 0.16
NEK3-210ENST00000620675 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
NEK3-210ENST00000620675 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
NEK3-210ENST00000620675 DHX32Q7L7V1 743 aaKnown RBP16.05■□□□□ 0.16
NEK3-210ENST00000620675 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
NEK3-210ENST00000620675 CCDC102AQ96A19 550 aa16.05■□□□□ 0.16
NEK3-210ENST00000620675 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
NEK3-210ENST00000620675 UBAC1Q9BSL1 405 aa16.05■□□□□ 0.16
NEK3-210ENST00000620675 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
NEK3-210ENST00000620675 TMX2Q9Y320 296 aa16.05■□□□□ 0.16
NEK3-210ENST00000620675 A0A0G2JLL6 359 aaPredicted RBP16.04■□□□□ 0.16
NEK3-210ENST00000620675 RAD21O60216 631 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 RPS6KB1P23443 525 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
NEK3-210ENST00000620675 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms