RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 RASAL2Q9UJF2 1139 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 FAM13AO94988 1023 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 ARL1P40616 181 aaPredicted RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 ATRIPQ8WXE1 791 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 ZSCAN10Q96SZ4 725 aaPredicted RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 NUP58Q9BVL2 599 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 ZBTB21Q9ULJ3 1066 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 PPP6R2O75170 966 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 KRT9P35527 623 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 NCBP1Q09161 790 aaKnown RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 FBXO18Q8NFZ0 1043 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 RBM17Q96I25 401 aaKnown RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 PTPRMP28827 1452 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 PLCG2P16885 1265 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 TTC31Q49AM3 519 aaPredicted RBP9.33□□□□□ -0.92
ALMS1-208ENST00000620466 ARHGEF25Q86VW2 580 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 GPATCH11Q8N954 259 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 TFCP2L1Q9NZI6 479 aa9.33□□□□□ -0.92
ALMS1-208ENST00000620466 RPAP1Q9BWH6 1393 aaPredicted RBP9.32□□□□□ -0.92
ALMS1-208ENST00000620466 PCCAP05165 728 aaPredicted RBP9.32□□□□□ -0.92
ALMS1-208ENST00000620466 MORC3Q14149 939 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 PTPN21Q16825 1174 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC155Q8N6L0 562 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 RCOR1Q9UKL0 485 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 NEXMIFQ5QGS0 1516 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 KCNJ18B7U540 433 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 TXKP42681 527 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 VAV2P52735 878 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 KCNJ12Q14500 433 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 GPCPD1Q9NPB8 672 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC87Q9NVE4 849 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 EFCAB8A8MWE9 144 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 ZEB2O60315 1214 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 DDX23Q9BUQ8 820 aaKnown RBP9.32□□□□□ -0.92
ALMS1-208ENST00000620466 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 TRAF5O00463 557 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 MNAT1P51948 309 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 GTF2A1P52655 376 aaPredicted RBP9.32□□□□□ -0.92
ALMS1-208ENST00000620466 TNNC1P63316 161 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 SLC39A14Q15043 492 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 GSTA5Q7RTV2 222 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 DDX12PQ92771 950 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 PAIP2Q9BPZ3 127 aaKnown RBP9.32□□□□□ -0.92
ALMS1-208ENST00000620466 EBAG9O00559 213 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 CYP2E1P05181 493 aaPredicted RBP9.32□□□□□ -0.92
ALMS1-208ENST00000620466 DCAF17Q5H9S7 520 aaPredicted RBP9.32□□□□□ -0.92
ALMS1-208ENST00000620466 CABP7Q86V35 215 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC51Q96ER9 411 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 GREM2Q9H772 168 aa9.32□□□□□ -0.92
ALMS1-208ENST00000620466 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 DMTNQ08495 405 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 TRAF1Q13077 416 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 NBPF14Q5TI25 921 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC65Q8IXS2 484 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 FANCBQ8NB91 859 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 LINC00301Q8NCQ3 95 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 SDR42E1Q8WUS8 393 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 BBXQ8WY36 941 aaPredicted RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 SERPINA10Q9UK55 444 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 KIF23Q02241 960 aaPredicted RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 CFAP58Q5T655 872 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 CCDC50Q8IVM0 306 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 TEX11Q8IYF3 940 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 PDLIM2Q96JY6 352 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 SELENOSQ9BQE4 189 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 CRB1P82279 1406 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 TOM1O60784 492 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 ETF1P62495 437 aaKnown RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 RAPGEF1Q13905 1077 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 TRIML1Q8N9V2 468 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 ARHGEF40Q8TER5 1519 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 SPDYE3A6NKU9 549 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 EEF2P13639 858 aaKnown RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 BCAMP50895 628 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 RASSF4Q9H2L5 321 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 RTCBQ9Y3I0 505 aaKnown RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 B4DLN1 442 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 PRPHP41219 470 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 MRPL12P52815 198 aaKnown RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 PUS7LQ9H0K6 701 aaKnown RBP9.31□□□□□ -0.92
ALMS1-208ENST00000620466 CSRNP2Q9H175 543 aa9.31□□□□□ -0.92
ALMS1-208ENST00000620466 MROH2AA6NES4 1674 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 PHKA1P46020 1223 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 BRD3Q15059 726 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 NONOQ15233 471 aaKnown RBP eCLIP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 ASIC2Q16515 512 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 DYMQ7RTS9 669 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 UBLCP1Q8WVY7 318 aaPredicted RBP9.3□□□□□ -0.92
ALMS1-208ENST00000620466 OSBP2Q969R2 916 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 IMPG2Q9BZV3 1241 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 TNKSO95271 1327 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 IKBKBO14920 756 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 COBLO75128 1261 aa9.3□□□□□ -0.92
ALMS1-208ENST00000620466 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms