RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 DPYDQ12882 1025 aa16.34■□□□□ 0.21
PCDHGA3-203ENST00000619750 RAD9BQ6WBX8 426 aa16.34■□□□□ 0.21
PCDHGA3-203ENST00000619750 CNNM2Q9H8M5 875 aa16.34■□□□□ 0.21
PCDHGA3-203ENST00000619750 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
PCDHGA3-203ENST00000619750 NEK11Q8NG66 645 aa16.33■□□□□ 0.21
PCDHGA3-203ENST00000619750 WASF1Q92558 559 aa16.33■□□□□ 0.21
PCDHGA3-203ENST00000619750 EEF2KMTQ96G04 330 aa16.33■□□□□ 0.21
PCDHGA3-203ENST00000619750 CCP110O43303 1012 aa16.33■□□□□ 0.2
PCDHGA3-203ENST00000619750 IGSF22Q8N9C0 903 aa16.33■□□□□ 0.2
PCDHGA3-203ENST00000619750 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
PCDHGA3-203ENST00000619750 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.2
PCDHGA3-203ENST00000619750 CHD4Q14839 1912 aa16.33■□□□□ 0.2
PCDHGA3-203ENST00000619750 SARSP49591 514 aaKnown RBP16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 KCNQ4P56696 695 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 MLKLQ8NB16 471 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 ACRBPQ8NEB7 543 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 FOXP1Q9H334 677 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 CTNND2Q9UQB3 1225 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 MROH5Q6ZUA9 1318 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 CASP14P31944 242 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 ST5P78524 1137 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 CHRNDQ07001 517 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 ALX1Q15699 326 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 ENOX1Q8TC92 643 aaKnown RBP16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 KIFC2Q96AC6 838 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 SPATA31A1Q5TZJ5 1347 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 ZRANB2O95218 330 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 PLCD1P51178 756 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 MYH3P11055 1940 aa16.32■□□□□ 0.2
PCDHGA3-203ENST00000619750 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 MYH2Q9UKX2 1941 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 EFCAB8A8MWE9 144 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 STX10O60499 249 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 NR1I3Q14994 352 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 PKN1Q16512 942 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 CCDC24Q8N4L8 307 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 PAGE5Q96GU1 130 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 PARD6BQ9BYG5 372 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 VPS16Q9H269 839 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 MRFAP1Q9Y605 127 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 AKR1B15C9JRZ8 316 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 THRAP3Q9Y2W1 955 aaKnown RBP16.31■□□□□ 0.2
PCDHGA3-203ENST00000619750 LRP6O75581 1613 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 RNF225M0QZC1 329 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 TBC1D8O95759 1140 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 MCM7P33993 719 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 MAP3K9P80192 1104 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 PPFIBP1Q86W92 1011 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 ZFP91Q96JP5 570 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 PLIN2Q99541 437 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 TFR2Q9UP52 801 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 NUP98P52948 1817 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 ZNF569Q5MCW4 686 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 CC2D1AQ6P1N0 951 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 CDCA7Q9BWT1 371 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 BAZ2AQ9UIF9 1905 aaKnown RBP16.3■□□□□ 0.2
PCDHGA3-203ENST00000619750 COL4A1P02462 1669 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 MAGEB6P1A0A0J9YX57 407 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 OAS2P29728 719 aaKnown RBP16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 IGHMBP2P38935 993 aaKnown RBP16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 PTGDRQ13258 359 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 C3orf67Q6ZVT6 689 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 APTXQ7Z2E3 356 aaKnown RBP16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 A0A1B0GTH6 734 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 CCDC175P0C221 793 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 KRT2P35908 639 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 SPATA31A5Q5VU36 1347 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 SPATA31A7Q8IWB4 1347 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 TAB2Q9NYJ8 693 aa16.29■□□□□ 0.2
PCDHGA3-203ENST00000619750 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 RHOXF2BP0C7M4 288 aa16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 KLRK1P26718 216 aa16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 SEC23AQ15436 765 aa16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 GPIHBP1Q8IV16 184 aa16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 ESR2Q92731 530 aa16.28■□□□□ 0.2
PCDHGA3-203ENST00000619750 RHOXF2Q9BQY4 288 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms