RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 AXDND1Q5T1B0 1012 aaPredicted RBP21.99■■□□□ 1.11
PSPC1-206ENST00000619300 NAV1Q8NEY1 1877 aa21.98■■□□□ 1.11
PSPC1-206ENST00000619300 PPP6R2O75170 966 aa21.98■■□□□ 1.11
PSPC1-206ENST00000619300 FMR1NBQ8N0W7 255 aaPredicted RBP21.98■■□□□ 1.11
PSPC1-206ENST00000619300 JMYQ8N9B5 988 aa21.98■■□□□ 1.11
PSPC1-206ENST00000619300 PNMA1Q8ND90 353 aa21.98■■□□□ 1.11
PSPC1-206ENST00000619300 DBNDD1Q9H9R9 158 aa21.98■■□□□ 1.11
PSPC1-206ENST00000619300 HHIPL2Q6UWX4 724 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 C7orf43Q8WVR3 580 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 MRVI1Q9Y6F6 885 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 CNTNAP5Q8WYK1 1306 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 A0A1B0GVL5 298 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 hCG_1642624A0A1W2PR95 340 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 CMA1P23946 247 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 MARCKSP29966 332 aaPredicted RBP21.97■■□□□ 1.11
PSPC1-206ENST00000619300 SASS6Q6UVJ0 657 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 SHISA4Q96DD7 197 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 PHF20Q9BVI0 1012 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.97■■□□□ 1.11
PSPC1-206ENST00000619300 VPS54Q9P1Q0 977 aa21.97■■□□□ 1.11
PSPC1-206ENST00000619300 ZNF219Q9P2Y4 722 aaPredicted RBP21.97■■□□□ 1.11
PSPC1-206ENST00000619300 WDHD1O75717 1129 aaPredicted RBP21.96■■□□□ 1.11
PSPC1-206ENST00000619300 SCNN1DP51172 638 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 NDUFA8P51970 172 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 NR5A1Q13285 461 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 RILPL1Q5EBL4 403 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 KCNQ5Q9NR82 932 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 USP40Q9NVE5 1235 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 TOB1P50616 345 aaPredicted RBP21.96■■□□□ 1.11
PSPC1-206ENST00000619300 NEDD1Q8NHV4 660 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 OXER1Q8TDS5 423 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 TEKT1Q969V4 418 aa21.96■■□□□ 1.11
PSPC1-206ENST00000619300 SF3B2Q13435 895 aaKnown RBP21.95■■□□□ 1.1
PSPC1-206ENST00000619300 BAG6P46379 1132 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 FKBP1AP62942 108 aaKnown RBP21.94■■□□□ 1.1
PSPC1-206ENST00000619300 PICALMQ13492 652 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 GRM4Q14833 912 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 STRIP1Q5VSL9 837 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 FAM43AQ8N2R8 423 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 CDK5RAP2Q96SN8 1893 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 TMEM47Q9BQJ4 181 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 MRIQ9BWK5 157 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 STX8Q9UNK0 236 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 KRT2P35908 639 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 GNAQP50148 359 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 CC2D2BQ6DHV5 1058 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 APOBEC3HQ6NTF7 200 aaKnown RBP21.94■■□□□ 1.1
PSPC1-206ENST00000619300 FAM200AQ8TCP9 573 aa21.94■■□□□ 1.1
PSPC1-206ENST00000619300 SLX4Q8IY92 1834 aa21.93■■□□□ 1.1
PSPC1-206ENST00000619300 ECE2O60344 883 aa21.93■■□□□ 1.1
PSPC1-206ENST00000619300 PDGFDQ9GZP0 370 aaPredicted RBP21.93■■□□□ 1.1
PSPC1-206ENST00000619300 DDX4Q9NQI0 724 aaKnown RBP21.93■■□□□ 1.1
PSPC1-206ENST00000619300 DDX60LQ5H9U9 1706 aaKnown RBP21.92■■□□□ 1.1
PSPC1-206ENST00000619300 SCG2P13521 617 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 PFKFB3Q16875 520 aaPredicted RBP21.92■■□□□ 1.1
PSPC1-206ENST00000619300 ANO6Q4KMQ2 910 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 CDC42EP5Q6NZY7 148 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 SDF4Q9BRK5 362 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 CABP5Q9NP86 173 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 MAD2L2Q9UI95 211 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 SNED1Q8TER0 1413 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 QSER1Q2KHR3 1735 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 CUTAO60888 179 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 CRKP46108 304 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 GABPAQ06546 454 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 DACT2Q5SW24 774 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 STAG2Q8N3U4 1231 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 BRMS1Q9HCU9 246 aa21.92■■□□□ 1.1
PSPC1-206ENST00000619300 ZNF202O95125 648 aa21.91■■□□□ 1.1
PSPC1-206ENST00000619300 PFKFB1P16118 471 aa21.91■■□□□ 1.1
PSPC1-206ENST00000619300 DEFB132Q7Z7B7 95 aa21.91■■□□□ 1.1
PSPC1-206ENST00000619300 ZDHHC15Q96MV8 337 aa21.91■■□□□ 1.1
PSPC1-206ENST00000619300 CAVIN2O95810 425 aa21.9■■□□□ 1.1
PSPC1-206ENST00000619300 HS1BP3Q53T59 392 aa21.9■■□□□ 1.1
PSPC1-206ENST00000619300 SUPT20HQ8NEM7 779 aa21.9■■□□□ 1.1
PSPC1-206ENST00000619300 USP25Q9UHP3 1055 aa21.9■■□□□ 1.1
PSPC1-206ENST00000619300 HDLBPQ00341 1268 aaKnown RBP21.9■■□□□ 1.1
PSPC1-206ENST00000619300 NPY5RQ15761 445 aa21.9■■□□□ 1.1
PSPC1-206ENST00000619300 SHC4Q6S5L8 630 aa21.9■■□□□ 1.1
PSPC1-206ENST00000619300 KRI1Q8N9T8 703 aaKnown RBP21.9■■□□□ 1.1
PSPC1-206ENST00000619300 FAM237AA0A1B0GTK4 181 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 PALM3A6NDB9 673 aaPredicted RBP21.89■■□□□ 1.1
PSPC1-206ENST00000619300 NOVP48745 357 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 KIAA2012Q0VF49 1180 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 AOC3Q16853 763 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 RESP18Q5W5W9 173 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 KIAA0825Q8IV33 1275 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 CEP95Q96GE4 821 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 LZTS2Q9BRK4 669 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 OSBPL5Q9H0X9 879 aaPredicted RBP21.89■■□□□ 1.1
PSPC1-206ENST00000619300 CEP131Q9UPN4 1083 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 HPSEQ9Y251 543 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 PCDHB6Q9Y5E3 794 aa21.89■■□□□ 1.1
PSPC1-206ENST00000619300 MYH1P12882 1939 aa21.89■■□□□ 1.09
PSPC1-206ENST00000619300 TOP1P11387 765 aaKnown RBP21.89■■□□□ 1.09
PSPC1-206ENST00000619300 PIBF1Q8WXW3 757 aa21.89■■□□□ 1.09
PSPC1-206ENST00000619300 CLIC6Q96NY7 704 aa21.89■■□□□ 1.09
PSPC1-206ENST00000619300 MYH6P13533 1939 aa21.89■■□□□ 1.09
PSPC1-206ENST00000619300 VEGFAP15692 232 aaPredicted RBP21.88■■□□□ 1.09
PSPC1-206ENST00000619300 NLRP5P59047 1200 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms