RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 FLT4P35916 1363 aa10.25□□□□□ -0.77
CBWD1-228ENST00000619157 BCL9O00512 1426 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 H3BRJ5 948 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 FDX2Q6P4F2 183 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 USHBP1Q8N6Y0 703 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 CAMKK2Q96RR4 588 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 KIF24Q5T7B8 1368 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 SHANK3Q9BYB0 1731 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 NCAPD2Q15021 1401 aa10.24□□□□□ -0.77
CBWD1-228ENST00000619157 IL2RBP14784 551 aa10.23□□□□□ -0.77
CBWD1-228ENST00000619157 EZH2Q15910 746 aaKnown RBP10.23□□□□□ -0.77
CBWD1-228ENST00000619157 ABI1Q8IZP0 508 aa10.23□□□□□ -0.77
CBWD1-228ENST00000619157 RUSC1Q9BVN2 902 aa10.23□□□□□ -0.77
CBWD1-228ENST00000619157 ADAM19Q9H013 955 aa10.23□□□□□ -0.77
CBWD1-228ENST00000619157 RNF208Q9H0X6 261 aa10.23□□□□□ -0.77
CBWD1-228ENST00000619157 SBF2Q86WG5 1849 aa10.23□□□□□ -0.77
CBWD1-228ENST00000619157 SMG6Q86US8 1419 aaKnown RBP10.23□□□□□ -0.77
CBWD1-228ENST00000619157 EXOC5O00471 708 aa10.22□□□□□ -0.77
CBWD1-228ENST00000619157 KCNQ2O43526 872 aa10.22□□□□□ -0.77
CBWD1-228ENST00000619157 GAS2O43903 313 aaKnown RBP10.22□□□□□ -0.77
CBWD1-228ENST00000619157 TRPA1O75762 1119 aa10.22□□□□□ -0.77
CBWD1-228ENST00000619157 TNNT2P45379 298 aaPredicted RBP10.22□□□□□ -0.77
CBWD1-228ENST00000619157 HGSNATQ68CP4 663 aa10.22□□□□□ -0.77
CBWD1-228ENST00000619157 FBXL6Q8N531 539 aa10.22□□□□□ -0.77
CBWD1-228ENST00000619157 CXXC1Q9P0U4 656 aaPredicted RBP10.22□□□□□ -0.77
CBWD1-228ENST00000619157 RREB1Q92766 1687 aa10.22□□□□□ -0.77
CBWD1-228ENST00000619157 CABP4P57796 275 aa10.21□□□□□ -0.77
CBWD1-228ENST00000619157 SF3B2Q13435 895 aaKnown RBP10.21□□□□□ -0.77
CBWD1-228ENST00000619157 FZD5Q13467 585 aa10.21□□□□□ -0.77
CBWD1-228ENST00000619157 SGO2Q562F6 1265 aa10.21□□□□□ -0.77
CBWD1-228ENST00000619157 HHIPQ96QV1 700 aa10.21□□□□□ -0.77
CBWD1-228ENST00000619157 ELP3Q9H9T3 547 aa10.21□□□□□ -0.77
CBWD1-228ENST00000619157 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
CBWD1-228ENST00000619157 STIM2Q9P246 746 aa10.21□□□□□ -0.77
CBWD1-228ENST00000619157 NSD2O96028 1365 aa10.21□□□□□ -0.78
CBWD1-228ENST00000619157 MAP2P11137 1827 aaKnown RBP10.21□□□□□ -0.78
CBWD1-228ENST00000619157 PIM2Q9P1W9 311 aa10.2□□□□□ -0.78
CBWD1-228ENST00000619157 NUP188Q5SRE5 1749 aa10.19□□□□□ -0.78
CBWD1-228ENST00000619157 NHSQ6T4R5 1651 aa10.19□□□□□ -0.78
CBWD1-228ENST00000619157 PPM1GO15355 546 aaPredicted RBP10.19□□□□□ -0.78
CBWD1-228ENST00000619157 MAP4P27816 1152 aaKnown RBP10.19□□□□□ -0.78
CBWD1-228ENST00000619157 EIF4A2Q14240 407 aaKnown RBP10.19□□□□□ -0.78
CBWD1-228ENST00000619157 ZNF438Q7Z4V0 828 aa10.19□□□□□ -0.78
CBWD1-228ENST00000619157 ATCAYQ86WG3 371 aa10.19□□□□□ -0.78
CBWD1-228ENST00000619157 HIF3AQ9Y2N7 669 aa10.19□□□□□ -0.78
CBWD1-228ENST00000619157 ARID1BQ8NFD5 2236 aaPredicted RBP10.19□□□□□ -0.78
CBWD1-228ENST00000619157 LCE1DQ5T752 114 aa10.18□□□□□ -0.78
CBWD1-228ENST00000619157 WNT8BQ93098 351 aa10.18□□□□□ -0.78
CBWD1-228ENST00000619157 ACSBG1Q96GR2 724 aa10.18□□□□□ -0.78
CBWD1-228ENST00000619157 ATG3Q9NT62 314 aa10.18□□□□□ -0.78
CBWD1-228ENST00000619157 ANGEL1Q9UNK9 670 aaKnown RBP10.18□□□□□ -0.78
CBWD1-228ENST00000619157 KNSTRNQ9Y448 316 aa10.18□□□□□ -0.78
CBWD1-228ENST00000619157 RGPD3A6NKT7 1758 aaPredicted RBP10.17□□□□□ -0.78
CBWD1-228ENST00000619157 RGPD4Q7Z3J3 1758 aa10.17□□□□□ -0.78
CBWD1-228ENST00000619157 F13BP05160 661 aa10.17□□□□□ -0.78
CBWD1-228ENST00000619157 MORC1Q86VD1 984 aa10.17□□□□□ -0.78
CBWD1-228ENST00000619157 SHISA5Q8N114 240 aa10.17□□□□□ -0.78
CBWD1-228ENST00000619157 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
CBWD1-228ENST00000619157 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
CBWD1-228ENST00000619157 OSGEPQ9NPF4 335 aa10.17□□□□□ -0.78
CBWD1-228ENST00000619157 LEMD3Q9Y2U8 911 aa10.17□□□□□ -0.78
CBWD1-228ENST00000619157 PKD1L3Q7Z443 1732 aa10.16□□□□□ -0.78
CBWD1-228ENST00000619157 PARD3Q8TEW0 1356 aa10.16□□□□□ -0.78
CBWD1-228ENST00000619157 CYP27B1O15528 508 aa10.16□□□□□ -0.78
CBWD1-228ENST00000619157 CC2D1BQ5T0F9 858 aaKnown RBP10.16□□□□□ -0.78
CBWD1-228ENST00000619157 PDE12Q6L8Q7 609 aaKnown RBP10.16□□□□□ -0.78
CBWD1-228ENST00000619157 C1orf127Q8N9H9 656 aa10.16□□□□□ -0.78
CBWD1-228ENST00000619157 SALL4Q9UJQ4 1053 aa10.16□□□□□ -0.78
CBWD1-228ENST00000619157 DOT1LQ8TEK3 1739 aa10.16□□□□□ -0.78
CBWD1-228ENST00000619157 NPC1L1Q9UHC9 1359 aa10.15□□□□□ -0.78
CBWD1-228ENST00000619157 IGSF1Q8N6C5 1336 aa10.15□□□□□ -0.78
CBWD1-228ENST00000619157 NFKBIEO00221 500 aa10.15□□□□□ -0.78
CBWD1-228ENST00000619157 PDE2AO00408 941 aaPredicted RBP10.15□□□□□ -0.78
CBWD1-228ENST00000619157 PLSCR1O15162 318 aa10.15□□□□□ -0.78
CBWD1-228ENST00000619157 DZANK1Q9NVP4 752 aa10.15□□□□□ -0.78
CBWD1-228ENST00000619157 TOGARAM1Q9Y4F4 1720 aa10.15□□□□□ -0.78
CBWD1-228ENST00000619157 COL3A1P02461 1466 aaPredicted RBP10.15□□□□□ -0.78
CBWD1-228ENST00000619157 BTAF1O14981 1849 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 A6NHS1 94 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 IL13P35225 146 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 C19orf57Q0VDD7 668 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 ELOAQ14241 798 aaKnown RBP10.14□□□□□ -0.79
CBWD1-228ENST00000619157 R3HDM1Q15032 1099 aaKnown RBP10.14□□□□□ -0.79
CBWD1-228ENST00000619157 AEBP1Q8IUX7 1158 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 USP26Q9BXU7 913 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 OSBPL1AQ9BXW6 950 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 KRTAP4-7Q9BYR0 210 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 SOX13Q9UN79 622 aa10.14□□□□□ -0.79
CBWD1-228ENST00000619157 CES1P23141 567 aa10.13□□□□□ -0.79
CBWD1-228ENST00000619157 MSMPQ1L6U9 139 aa10.13□□□□□ -0.79
CBWD1-228ENST00000619157 TMEM164Q5U3C3 297 aa10.13□□□□□ -0.79
CBWD1-228ENST00000619157 OGFOD2Q6N063 350 aa10.13□□□□□ -0.79
CBWD1-228ENST00000619157 C12orf50Q8NA57 414 aaPredicted RBP10.13□□□□□ -0.79
CBWD1-228ENST00000619157 RAPGEF4Q8WZA2 1011 aa10.13□□□□□ -0.79
CBWD1-228ENST00000619157 CCDC39Q9UFE4 941 aa10.13□□□□□ -0.79
CBWD1-228ENST00000619157 PAPPAQ13219 1627 aa10.13□□□□□ -0.79
CBWD1-228ENST00000619157 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.12□□□□□ -0.79
CBWD1-228ENST00000619157 ARL4DP49703 201 aa10.12□□□□□ -0.79
CBWD1-228ENST00000619157 MTHFSP49914 203 aa10.12□□□□□ -0.79
CBWD1-228ENST00000619157 CNGB1Q14028 1251 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms