RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
C9orf50-202ENST00000619117 SEPT2Q15019 361 aa18.3■□□□□ 0.52
C9orf50-202ENST00000619117 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
C9orf50-202ENST00000619117 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
C9orf50-202ENST00000619117 TMEM179Q6ZVK1 233 aa18.3■□□□□ 0.52
C9orf50-202ENST00000619117 CCDC17Q96LX7 622 aa18.3■□□□□ 0.52
C9orf50-202ENST00000619117 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
C9orf50-202ENST00000619117 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
C9orf50-202ENST00000619117 MPHOSPH10O00566 681 aaKnown RBP18.29■□□□□ 0.52
C9orf50-202ENST00000619117 NUCB1Q02818 461 aa18.29■□□□□ 0.52
C9orf50-202ENST00000619117 CHD1LQ86WJ1 897 aa18.29■□□□□ 0.52
C9orf50-202ENST00000619117 ANKRD13CQ8N6S4 541 aa18.29■□□□□ 0.52
C9orf50-202ENST00000619117 ACER1Q8TDN7 264 aa18.29■□□□□ 0.52
C9orf50-202ENST00000619117 EVI5LQ96CN4 794 aa18.29■□□□□ 0.52
C9orf50-202ENST00000619117 EPB41L4AQ9HCS5 686 aaPredicted RBP18.29■□□□□ 0.52
C9orf50-202ENST00000619117 MORF4L1Q9UBU8 362 aa18.29■□□□□ 0.52
C9orf50-202ENST00000619117 MYPNQ86TC9 1320 aa18.28■□□□□ 0.52
C9orf50-202ENST00000619117 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
C9orf50-202ENST00000619117 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
C9orf50-202ENST00000619117 ZNF333Q96JL9 665 aa18.28■□□□□ 0.52
C9orf50-202ENST00000619117 ECM2O94769 699 aaPredicted RBP18.27■□□□□ 0.52
C9orf50-202ENST00000619117 AKR1B1P15121 316 aa18.27■□□□□ 0.52
C9orf50-202ENST00000619117 VCAM1P19320 739 aa18.27■□□□□ 0.52
C9orf50-202ENST00000619117 HERVK_113P62684 666 aa18.27■□□□□ 0.52
C9orf50-202ENST00000619117 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.52
C9orf50-202ENST00000619117 B4GALNT3Q6L9W6 998 aa18.27■□□□□ 0.52
C9orf50-202ENST00000619117 GTF3C2Q8WUA4 911 aaPredicted RBP18.27■□□□□ 0.52
C9orf50-202ENST00000619117 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
C9orf50-202ENST00000619117 TDO2P48775 406 aa18.26■□□□□ 0.51
C9orf50-202ENST00000619117 MLLT1Q03111 559 aaPredicted RBP18.26■□□□□ 0.51
C9orf50-202ENST00000619117 PRKCZQ05513 592 aa18.26■□□□□ 0.51
C9orf50-202ENST00000619117 NBPF11Q86T75 865 aa18.26■□□□□ 0.51
C9orf50-202ENST00000619117 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
C9orf50-202ENST00000619117 A0A1W2PRG0 241 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L15C9J2P7 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 PATL2C9JE40 543 aaKnown RBP18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L13C9JLJ4 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L11C9JVI0 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L18D6R9N7 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L22D6RA61 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L17D6RBQ6 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L19D6RCP7 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L20D6RJB6 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 TNPO2O14787 897 aaKnown RBP18.25■□□□□ 0.51
C9orf50-202ENST00000619117 ICA1Q05084 483 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 USP17L24Q0WX57 530 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 OSBPL3Q9H4L5 887 aa18.25■□□□□ 0.51
C9orf50-202ENST00000619117 MGAMO43451 1857 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 MYH8P13535 1937 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 APPP05067 770 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 IFNL3Q8IZI9 196 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 RAET1EQ8TD07 263 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 NACAP1Q9BZK3 213 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 SH2D4AQ9H788 454 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 ARHGEF10LQ9HCE6 1279 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 GABRQQ9UN88 632 aa18.24■□□□□ 0.51
C9orf50-202ENST00000619117 RBBP6Q7Z6E9 1792 aaKnown RBP18.23■□□□□ 0.51
C9orf50-202ENST00000619117 RASA1P20936 1047 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 GRK4P32298 578 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 IRF5Q13568 498 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 LBX2Q6XYB7 198 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 CATSPERGQ6ZRH7 1159 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 CLEC10AQ8IUN9 316 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 SIAH1Q8IUQ4 282 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 SH3TC2Q8TF17 1288 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 COA7Q96BR5 231 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 RPAP3Q9H6T3 665 aaPredicted RBP18.23■□□□□ 0.51
C9orf50-202ENST00000619117 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 TMX2Q9Y320 296 aa18.23■□□□□ 0.51
C9orf50-202ENST00000619117 GREB1LQ9C091 1923 aaPredicted RBP18.22■□□□□ 0.51
C9orf50-202ENST00000619117 MINDY4BA8MYZ0 360 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 FOXP2O15409 715 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 FLT3LGP49771 235 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 IRX6P78412 446 aaPredicted RBP18.22■□□□□ 0.51
C9orf50-202ENST00000619117 SLAIN1Q8ND83 568 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 GPRC5AQ8NFJ5 357 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 LPAR1Q92633 364 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 NAPBQ9H115 298 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 HELLSQ9NRZ9 838 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 RBPJLQ9UBG7 517 aa18.22■□□□□ 0.51
C9orf50-202ENST00000619117 POTEFA5A3E0 1075 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 ERVK-9P63128 1117 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 ERVK-24P63145 666 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 POTEEQ6S8J3 1075 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 CCDC129Q6ZRS4 1044 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.21■□□□□ 0.51
C9orf50-202ENST00000619117 VCPKMTQ9H867 229 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 ZNF287Q9HBT7 754 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 RABGAP1Q9Y3P9 1069 aa18.21■□□□□ 0.51
C9orf50-202ENST00000619117 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
C9orf50-202ENST00000619117 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
C9orf50-202ENST00000619117 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
C9orf50-202ENST00000619117 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
C9orf50-202ENST00000619117 TMEM106CQ9BVX2 250 aa18.2■□□□□ 0.5
C9orf50-202ENST00000619117 MKNK2Q9HBH9 465 aa18.2■□□□□ 0.5
C9orf50-202ENST00000619117 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
C9orf50-202ENST00000619117 ADCY3O60266 1144 aa18.19■□□□□ 0.5
C9orf50-202ENST00000619117 PEX10O60683 326 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms