RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SMARCC2Q8TAQ2 1214 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 RNF26Q9BY78 433 aaPredicted RBP15.62■□□□□ 0.09
CNOT3-210ENST00000618939 LIFRP42702 1097 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 ARID5AQ03989 594 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 KRT25Q7Z3Z0 450 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 WDHD1O75717 1129 aaPredicted RBP15.62■□□□□ 0.09
CNOT3-210ENST00000618939 TXKP42681 527 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 FOXO4P98177 505 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 TUBB2AQ13885 445 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 UBE4AQ14139 1066 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 IFI16Q16666 785 aaKnown RBP15.62■□□□□ 0.09
CNOT3-210ENST00000618939 MAPKAPK5Q8IW41 473 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 LCORLQ8N3X6 602 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 ZBTB9Q96C00 473 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 DESI2Q9BSY9 194 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 TUBB2BQ9BVA1 445 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 PPP2R2CQ9Y2T4 447 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 RIMBP2O15034 1052 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 CNNM4Q6P4Q7 775 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 STOX1Q6ZVD7 989 aa15.62■□□□□ 0.09
CNOT3-210ENST00000618939 ERVV-1B6SEH8 477 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 SCG2P13521 617 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 MRPL12P52815 198 aaKnown RBP15.61■□□□□ 0.09
CNOT3-210ENST00000618939 RASGRF1Q13972 1273 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 HLFQ16534 295 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 TAX1BP1Q86VP1 789 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 SYCP3Q8IZU3 236 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 GPCPD1Q9NPB8 672 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 GABPB1Q06547 395 aaPredicted RBP15.61■□□□□ 0.09
CNOT3-210ENST00000618939 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
CNOT3-210ENST00000618939 SARM1Q6SZW1 724 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 TGFBRAP1Q8WUH2 860 aa15.61■□□□□ 0.09
CNOT3-210ENST00000618939 STRBPQ96SI9 672 aaKnown RBP15.61■□□□□ 0.09
CNOT3-210ENST00000618939 MACROD2A1Z1Q3 448 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 MMP1P03956 469 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 PTGDRQ13258 359 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 NR5A1Q13285 461 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 PRPF4BQ13523 1007 aaKnown RBP15.6■□□□□ 0.09
CNOT3-210ENST00000618939 SPATA1Q5VX52 437 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 BLIDQ8IZY5 108 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 SLF1Q9BQI6 1058 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 LZTS2Q9BRK4 669 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 CSRNP2Q9H175 543 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 LMTK3Q96Q04 1460 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 PHACTR2O75167 634 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 DDAH1O94760 285 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 PCP11498 1178 aaKnown RBP15.6■□□□□ 0.09
CNOT3-210ENST00000618939 USPL1Q5W0Q7 1092 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 HDXQ7Z353 690 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 ATG9AQ7Z3C6 839 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 CERS3Q8IU89 383 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 SHPRHQ149N8 1683 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 IFFO1Q0D2I5 559 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 BRINP3Q76B58 766 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 TRMT1LQ7Z2T5 733 aaKnown RBP15.6■□□□□ 0.09
CNOT3-210ENST00000618939 PNMA1Q8ND90 353 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 SYMPKQ92797 1274 aaKnown RBP15.6■□□□□ 0.09
CNOT3-210ENST00000618939 PPP1R13BQ96KQ4 1090 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 ISCA1Q9BUE6 129 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 GOLPH3LQ9H4A5 285 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 PPP1R1BQ9UD71 204 aaPredicted RBP15.6■□□□□ 0.09
CNOT3-210ENST00000618939 SPDYE3A6NKU9 549 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 TRAF5O00463 557 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 CHGBP05060 677 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 USP8P40818 1118 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 EIF6P56537 245 aaKnown RBP15.6■□□□□ 0.09
CNOT3-210ENST00000618939 CCDC51Q96ER9 411 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 VPS18Q9P253 973 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 GGA1Q9UJY5 639 aa15.6■□□□□ 0.09
CNOT3-210ENST00000618939 UBAP1LF5GYI3 381 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 TRAF1Q13077 416 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 LONRF3Q496Y0 759 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 MB21D2Q8IYB1 491 aaPredicted RBP15.59■□□□□ 0.09
CNOT3-210ENST00000618939 SYNE4Q8N205 404 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 LRWD1Q9UFC0 647 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 ZNF609O15014 1411 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 HSF2BPO75031 334 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 CAPN2P17655 700 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 CABP7Q86V35 215 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 TBC1D10CQ8IV04 446 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 MAATS1Q7Z4T9 603 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
CNOT3-210ENST00000618939 STX10O60499 249 aa15.58■□□□□ 0.09
CNOT3-210ENST00000618939 NUP58Q9BVL2 599 aa15.58■□□□□ 0.09
CNOT3-210ENST00000618939 TAF6LQ9Y6J9 622 aa15.58■□□□□ 0.09
CNOT3-210ENST00000618939 ARID5BQ14865 1188 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
CNOT3-210ENST00000618939 BCCIPQ9P287 314 aaKnown RBP eCLIP15.58■□□□□ 0.08
CNOT3-210ENST00000618939 PALLDQ8WX93 1383 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 UTYO14607 1347 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 SSR1P43307 286 aaKnown RBP15.58■□□□□ 0.08
CNOT3-210ENST00000618939 CCDC65Q8IXS2 484 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 FMR1NBQ8N0W7 255 aaPredicted RBP15.58■□□□□ 0.08
CNOT3-210ENST00000618939 TSGA10Q9BZW7 698 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 ERCC5P28715 1186 aaPredicted RBP15.58■□□□□ 0.08
CNOT3-210ENST00000618939 PDIA6Q15084 440 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 JAKMIP2Q96AA8 810 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 SAMM50Q9Y512 469 aa15.58■□□□□ 0.08
CNOT3-210ENST00000618939 GTPBP6O43824 516 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms