RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 SEPT2Q15019 361 aa18.5■□□□□ 0.55
SRGAP2C-205ENST00000617209 SMCR8Q8TEV9 937 aaPredicted RBP18.5■□□□□ 0.55
SRGAP2C-205ENST00000617209 ASCC2Q9H1I8 757 aaPredicted RBP18.5■□□□□ 0.55
SRGAP2C-205ENST00000617209 HPS5Q9UPZ3 1129 aa18.5■□□□□ 0.55
SRGAP2C-205ENST00000617209 ROBO3Q96MS0 1386 aa18.5■□□□□ 0.55
SRGAP2C-205ENST00000617209 MPHOSPH10O00566 681 aaKnown RBP18.49■□□□□ 0.55
SRGAP2C-205ENST00000617209 TDO2P48775 406 aa18.49■□□□□ 0.55
SRGAP2C-205ENST00000617209 PRMT2P55345 433 aa18.49■□□□□ 0.55
SRGAP2C-205ENST00000617209 MCMDC2Q4G0Z9 681 aa18.49■□□□□ 0.55
SRGAP2C-205ENST00000617209 ACER1Q8TDN7 264 aa18.49■□□□□ 0.55
SRGAP2C-205ENST00000617209 MGAMO43451 1857 aa18.49■□□□□ 0.55
SRGAP2C-205ENST00000617209 MINDY4BA8MYZ0 360 aa18.48■□□□□ 0.55
SRGAP2C-205ENST00000617209 AKR1B1P15121 316 aa18.48■□□□□ 0.55
SRGAP2C-205ENST00000617209 SIAH1Q8IUQ4 282 aa18.48■□□□□ 0.55
SRGAP2C-205ENST00000617209 RILPL2Q969X0 211 aa18.48■□□□□ 0.55
SRGAP2C-205ENST00000617209 FEZ1Q99689 392 aa18.48■□□□□ 0.55
SRGAP2C-205ENST00000617209 ZNF287Q9HBT7 754 aa18.48■□□□□ 0.55
SRGAP2C-205ENST00000617209 CCDC85CA6NKD9 419 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 FOXP2O15409 715 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 CAPN15O75808 1086 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 PDE4AP27815 886 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 PSMC4P43686 418 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 ALX1Q15699 326 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 NAPBQ9H115 298 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 KANSL2Q9H9L4 492 aa18.47■□□□□ 0.55
SRGAP2C-205ENST00000617209 A0A1W2PRG0 241 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 SDSP20132 328 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 RASA1P20936 1047 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 HOXD10P28358 340 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 CTGFP29279 349 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 IRX3P78415 501 aaPredicted RBP18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 FAM110CQ1W6H9 321 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 TRIM47Q96LD4 638 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 FAM227BQ96M60 508 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 P2RX7Q99572 595 aaKnown RBP18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 MKNK2Q9HBH9 465 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 MORF4L1Q9UBU8 362 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 TMX2Q9Y320 296 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 GREB1LQ9C091 1923 aaPredicted RBP18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 ZSWIM8A7E2V4 1837 aa18.46■□□□□ 0.55
SRGAP2C-205ENST00000617209 A0A0D9SFI3 127 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L15C9J2P7 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L13C9JLJ4 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L11C9JVI0 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L18D6R9N7 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L22D6RA61 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L17D6RBQ6 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L19D6RCP7 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L20D6RJB6 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 HIP1O00291 1037 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 USP17L24Q0WX57 530 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 CATSPERGQ6ZRH7 1159 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 CCDC129Q6ZRS4 1044 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 SH2D4AQ9H788 454 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 ARHGEF10LQ9HCE6 1279 aa18.45■□□□□ 0.54
SRGAP2C-205ENST00000617209 DOCK3Q8IZD9 2030 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 FMNL1O95466 1100 aaPredicted RBP18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 SLC3A2P08195 630 aaKnown RBP18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 VCAM1P19320 739 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 FCGRTP55899 365 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 HERVK_113P62684 666 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 ZYXQ15942 572 aaKnown RBP18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 ANKRD13CQ8N6S4 541 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 LPAR1Q92633 364 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 SRRDQ9UH36 339 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 ANAPC4Q9UJX5 808 aa18.44■□□□□ 0.54
SRGAP2C-205ENST00000617209 RGS19P49795 217 aa18.43■□□□□ 0.54
SRGAP2C-205ENST00000617209 ICA1Q05084 483 aa18.43■□□□□ 0.54
SRGAP2C-205ENST00000617209 PDE4BQ07343 736 aa18.43■□□□□ 0.54
SRGAP2C-205ENST00000617209 PPARAQ07869 468 aa18.43■□□□□ 0.54
SRGAP2C-205ENST00000617209 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
SRGAP2C-205ENST00000617209 LBX2Q6XYB7 198 aa18.43■□□□□ 0.54
SRGAP2C-205ENST00000617209 ZMYM6O95789 1325 aa18.43■□□□□ 0.54
SRGAP2C-205ENST00000617209 FGAP02671 866 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 HSPD1P10809 573 aaKnown RBP18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 EEF2P13639 858 aaKnown RBP18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 TTC22Q5TAA0 569 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 VCPKMTQ9H867 229 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 NYAP2Q9P242 653 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 RBPJLQ9UBG7 517 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 HTTP42858 3142 aa18.42■□□□□ 0.54
SRGAP2C-205ENST00000617209 IGKV6D-41A0A0C4DH26 115 aa18.41■□□□□ 0.54
SRGAP2C-205ENST00000617209 FGRP09769 529 aa18.41■□□□□ 0.54
SRGAP2C-205ENST00000617209 ZNF589Q86UQ0 364 aaPredicted RBP18.41■□□□□ 0.54
SRGAP2C-205ENST00000617209 GPRC5AQ8NFJ5 357 aa18.41■□□□□ 0.54
SRGAP2C-205ENST00000617209 DIAPH3Q9NSV4 1193 aa18.41■□□□□ 0.54
SRGAP2C-205ENST00000617209 PTCH2Q9Y6C5 1203 aa18.41■□□□□ 0.54
SRGAP2C-205ENST00000617209 COG2Q14746 738 aa18.4■□□□□ 0.54
SRGAP2C-205ENST00000617209 POTEEQ6S8J3 1075 aa18.4■□□□□ 0.54
SRGAP2C-205ENST00000617209 NBPF11Q86T75 865 aa18.4■□□□□ 0.54
SRGAP2C-205ENST00000617209 CLEC10AQ8IUN9 316 aa18.4■□□□□ 0.54
SRGAP2C-205ENST00000617209 NEDD1Q8NHV4 660 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms