RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 NDUFB9Q9Y6M9 179 aa17.87■□□□□ 0.45
UBXN1-218ENST00000616865 JAG1P78504 1218 aa17.86■□□□□ 0.45
UBXN1-218ENST00000616865 TTC22Q5TAA0 569 aa17.86■□□□□ 0.45
UBXN1-218ENST00000616865 METTL16Q86W50 562 aaKnown RBP17.86■□□□□ 0.45
UBXN1-218ENST00000616865 RILPL2Q969X0 211 aa17.86■□□□□ 0.45
UBXN1-218ENST00000616865 MYH1P12882 1939 aa17.86■□□□□ 0.45
UBXN1-218ENST00000616865 SOX1O00570 391 aaPredicted RBP17.85■□□□□ 0.45
UBXN1-218ENST00000616865 GDF11O95390 407 aa17.85■□□□□ 0.45
UBXN1-218ENST00000616865 CYP2E1P05181 493 aaPredicted RBP17.85■□□□□ 0.45
UBXN1-218ENST00000616865 MNX1P50219 401 aaPredicted RBP17.85■□□□□ 0.45
UBXN1-218ENST00000616865 HERVK_113P62684 666 aa17.85■□□□□ 0.45
UBXN1-218ENST00000616865 SHROOM1Q2M3G4 852 aaPredicted RBP17.85■□□□□ 0.45
UBXN1-218ENST00000616865 CRACR2BQ8N4Y2 399 aaPredicted RBP17.85■□□□□ 0.45
UBXN1-218ENST00000616865 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
UBXN1-218ENST00000616865 TRIM34Q9BYJ4 488 aa17.85■□□□□ 0.45
UBXN1-218ENST00000616865 GINM1Q9NU53 330 aa17.85■□□□□ 0.45
UBXN1-218ENST00000616865 ZBTB21Q9ULJ3 1066 aa17.85■□□□□ 0.45
UBXN1-218ENST00000616865 FRMPD3Q5JV73 1810 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 C19orf81C9J6K1 198 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 USP17L10C9JJH3 530 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 IGSF3O75054 1194 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 IDH1O75874 414 aaKnown RBP17.84■□□□□ 0.45
UBXN1-218ENST00000616865 CYP2B6P20813 491 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
UBXN1-218ENST00000616865 MAP3K21Q5TCX8 1036 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 FOXP4Q8IVH2 680 aaPredicted RBP17.84■□□□□ 0.45
UBXN1-218ENST00000616865 C7orf61Q8IZ16 206 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 EVI5LQ96CN4 794 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 EDC3Q96F86 508 aaKnown RBP17.84■□□□□ 0.45
UBXN1-218ENST00000616865 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
UBXN1-218ENST00000616865 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.84■□□□□ 0.45
UBXN1-218ENST00000616865 NBPF3Q9H094 633 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 TXNRD2Q9NNW7 524 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 OGDHLQ9ULD0 1010 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 PALD1Q9ULE6 856 aa17.84■□□□□ 0.45
UBXN1-218ENST00000616865 PEX10O60683 326 aa17.83■□□□□ 0.44
UBXN1-218ENST00000616865 MAP3K12Q12852 859 aa17.83■□□□□ 0.44
UBXN1-218ENST00000616865 ZSCAN25Q6NSZ9 544 aa17.83■□□□□ 0.44
UBXN1-218ENST00000616865 GPRC5AQ8NFJ5 357 aa17.83■□□□□ 0.44
UBXN1-218ENST00000616865 GDF15Q99988 308 aa17.83■□□□□ 0.44
UBXN1-218ENST00000616865 NUDT12Q9BQG2 462 aa17.83■□□□□ 0.44
UBXN1-218ENST00000616865 ANTXR1Q9H6X2 564 aa17.83■□□□□ 0.44
UBXN1-218ENST00000616865 PIH1D3Q9NQM4 214 aaKnown RBP17.83■□□□□ 0.44
UBXN1-218ENST00000616865 HLA-DOAP06340 250 aa17.82■□□□□ 0.44
UBXN1-218ENST00000616865 XRCC5P13010 732 aaKnown RBP17.82■□□□□ 0.44
UBXN1-218ENST00000616865 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
UBXN1-218ENST00000616865 LRCH3Q96II8 777 aa17.82■□□□□ 0.44
UBXN1-218ENST00000616865 C11orf49Q9H6J7 331 aa17.82■□□□□ 0.44
UBXN1-218ENST00000616865 SAP30BPQ9UHR5 308 aaKnown RBP17.82■□□□□ 0.44
UBXN1-218ENST00000616865 ZMYND8Q9ULU4 1186 aaPredicted RBP17.82■□□□□ 0.44
UBXN1-218ENST00000616865 MAPK4P31152 587 aa17.81■□□□□ 0.44
UBXN1-218ENST00000616865 BMP8BP34820 402 aa17.81■□□□□ 0.44
UBXN1-218ENST00000616865 ERVK-9P63128 1117 aa17.81■□□□□ 0.44
UBXN1-218ENST00000616865 ERVK-24P63145 666 aa17.81■□□□□ 0.44
UBXN1-218ENST00000616865 KBTBD3Q8NAB2 608 aa17.81■□□□□ 0.44
UBXN1-218ENST00000616865 GTF3C2Q8WUA4 911 aaPredicted RBP17.81■□□□□ 0.44
UBXN1-218ENST00000616865 RBPJLQ9UBG7 517 aa17.81■□□□□ 0.44
UBXN1-218ENST00000616865 COL6A3P12111 3177 aa17.81■□□□□ 0.44
UBXN1-218ENST00000616865 GSPT1P15170 499 aaKnown RBP17.8■□□□□ 0.44
UBXN1-218ENST00000616865 ZKSCAN1P17029 563 aaPredicted RBP17.8■□□□□ 0.44
UBXN1-218ENST00000616865 DYNLL1P63167 89 aaKnown RBP17.8■□□□□ 0.44
UBXN1-218ENST00000616865 GPR142Q7Z601 462 aa17.8■□□□□ 0.44
UBXN1-218ENST00000616865 TRMT44Q8IYL2 757 aaKnown RBP17.8■□□□□ 0.44
UBXN1-218ENST00000616865 USP6NLQ92738 828 aa17.8■□□□□ 0.44
UBXN1-218ENST00000616865 PORCNQ9H237 461 aa17.8■□□□□ 0.44
UBXN1-218ENST00000616865 EMILIN3Q9NT22 766 aa17.8■□□□□ 0.44
UBXN1-218ENST00000616865 NAV1Q8NEY1 1877 aa17.8■□□□□ 0.44
UBXN1-218ENST00000616865 PFASO15067 1338 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 SDSP20132 328 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 RGS2P41220 211 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 Q3C1V9 767 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 USP17L2Q6R6M4 530 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 C12orf42Q96LP6 360 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 APBA2Q99767 749 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 PAGR1Q9BTK6 254 aa17.79■□□□□ 0.44
UBXN1-218ENST00000616865 GH2P01242 217 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 ZFYP08048 801 aaPredicted RBP17.78■□□□□ 0.44
UBXN1-218ENST00000616865 SYN1P17600 705 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 CYP7A1P22680 504 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 CACNB2Q08289 660 aaPredicted RBP17.78■□□□□ 0.44
UBXN1-218ENST00000616865 MORN1Q5T089 497 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 POTEEQ6S8J3 1075 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 CERS3Q8IU89 383 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 CCAR1Q8IX12 1150 aaKnown RBP17.78■□□□□ 0.44
UBXN1-218ENST00000616865 MAGEB6Q8N7X4 407 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
UBXN1-218ENST00000616865 HIP1O00291 1037 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 COL6A1P12109 1028 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 MAGEA10P43363 369 aaPredicted RBP17.77■□□□□ 0.44
UBXN1-218ENST00000616865 CCL14Q16627 93 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 TATDN1Q6P1N9 297 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 PLEKHH3Q7Z736 793 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 FEZ1Q99689 392 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 EHD4Q9H223 541 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 DIAPH3Q9NSV4 1193 aa17.77■□□□□ 0.44
UBXN1-218ENST00000616865 RNF113AO15541 343 aaKnown RBP17.76■□□□□ 0.43
UBXN1-218ENST00000616865 PDE6AP16499 860 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms