RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RIOK3O14730 519 aaKnown RBP14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 STAG1Q8WVM7 1258 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 MRFAP1L1Q96HT8 127 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 IMPACTQ9P2X3 320 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 SPATA31A1Q5TZJ5 1347 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 SCNN1DP51172 638 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 MSL1Q68DK7 614 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 FANCLQ9NW38 375 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 SLU7O95391 586 aaKnown RBP14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 CCDC175P0C221 793 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 SYCP1Q15431 976 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 ALX1Q15699 326 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 IGSF22Q8N9C0 903 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 LZTS2Q9BRK4 669 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 LY9Q9HBG7 655 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 LZTFL1Q9NQ48 299 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 SEPT11Q9NVA2 429 aaKnown RBP14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 PPP1R12BO60237 982 aaPredicted RBP14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 TNIP1Q15025 636 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 DYNLL2Q96FJ2 89 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 CSRNP2Q9H175 543 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 HDAC9Q9UKV0 1011 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 SYNRGQ9UMZ2 1314 aa14.9□□□□□ -0.02
PPP4R3B-206ENST00000616407 SMCO2A6NFE2 343 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 INF2Q27J81 1249 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 ARHGEF1Q92888 912 aaKnown RBP14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 SPDYE3A6NKU9 549 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 AKR1B15C9JRZ8 316 aaPredicted RBP14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 KRT25Q7Z3Z0 450 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 USO1O60763 962 aaKnown RBP14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 ERMNQ8TAM6 284 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 FAM84BQ96KN1 310 aaPredicted RBP14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 GOLPH3LQ9H4A5 285 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 MYO1BO43795 1136 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 DNA2P51530 1060 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 PDE4DQ08499 809 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 PDLIM2Q96JY6 352 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 UIMC1Q96RL1 719 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 PCDHB6Q9Y5E3 794 aa14.89□□□□□ -0.03
PPP4R3B-206ENST00000616407 AKR1B10O60218 316 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 CYP2D6P10635 497 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 ALDH1B1P30837 517 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 GRAPQ13588 217 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 GRAPLQ8TC17 118 aaPredicted RBP14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 MMRN2Q9H8L6 949 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 H0YIN7 160 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 TSC1Q92574 1164 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 KNDC1Q76NI1 1749 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 UBN2Q6ZU65 1347 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 PLEKHA8P1O95397 391 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 SV2BQ7L1I2 683 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 LRRC8AQ8IWT6 810 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 REXO1Q8N1G1 1221 aaKnown RBP14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 RASGRP4Q8TDF6 673 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 SYMPKQ92797 1274 aaKnown RBP14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 BRIP1Q9BX63 1249 aa14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 BIN2Q9UBW5 565 aaPredicted RBP14.88□□□□□ -0.03
PPP4R3B-206ENST00000616407 SLC1A4P43007 532 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 MYRIPQ8NFW9 859 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 PRDM10Q9NQV6 1147 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 PAK1Q13153 545 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 KIAA0825Q8IV33 1275 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 LRRC47Q8N1G4 583 aaKnown RBP14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 EHMT1Q9H9B1 1298 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 BICDL2A1A5D9 508 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 BBOX1O75936 387 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 LONRF3Q496Y0 759 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 GRAMD1CQ8IYS0 662 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 LRWD1Q9UFC0 647 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 FRMPD2Q68DX3 1309 aaPredicted RBP14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 PIK3C2AO00443 1686 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 PEAK1Q9H792 1746 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 ADCY7P51828 1080 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 ANTXR2P58335 489 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 CACTINQ8WUQ7 758 aaKnown RBP14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 TIGD1Q96MW7 591 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 LUC7L2Q9Y383 392 aaKnown RBP14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 SAMM50Q9Y512 469 aa14.87□□□□□ -0.03
PPP4R3B-206ENST00000616407 CTDNEP1O95476 244 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 CNGA4Q8IV77 575 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 TBCAO75347 108 aaKnown RBP14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 NTSR2O95665 410 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 RBM26Q5T8P6 1007 aaKnown RBP14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 ZNF512BQ96KM6 892 aaPredicted RBP14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 USP17L3A6NCW0 530 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 USP17L4A6NCW7 530 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 TUBB4AP04350 444 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 ZFYVE27Q5T4F4 411 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 USP17L1Q7RTZ2 530 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 NLGN1Q8N2Q7 840 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 TAB2Q9NYJ8 693 aa14.86□□□□□ -0.03
PPP4R3B-206ENST00000616407 KIF28PB7ZC32 967 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 PRPF3O43395 683 aaKnown RBP14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 CYLC1P35663 651 aaPredicted RBP14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 IQCEQ6IPM2 695 aa14.85□□□□□ -0.03
PPP4R3B-206ENST00000616407 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms