RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 HDAC9Q9UKV0 1011 aa15.01□□□□□ -0.01
FOXN3-219ENST00000615335 AP5Z1O43299 807 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 KIF1CO43896 1103 aaKnown RBP15□□□□□ -0.01
FOXN3-219ENST00000615335 USP17L8P0C7I0 530 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 PLCG2P16885 1265 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 PTGS1P23219 599 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 HDLBPQ00341 1268 aaKnown RBP15□□□□□ -0.01
FOXN3-219ENST00000615335 IMMTQ16891 758 aaKnown RBP15□□□□□ -0.01
FOXN3-219ENST00000615335 GMLQ99445 158 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 TFIP11Q9UBB9 837 aaKnown RBP15□□□□□ -0.01
FOXN3-219ENST00000615335 ZNF215Q9UL58 517 aaPredicted RBP15□□□□□ -0.01
FOXN3-219ENST00000615335 ADAMTSL1Q8N6G6 1762 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 GRIN3BO60391 1043 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 USP5P45974 858 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 HAND2P61296 217 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15□□□□□ -0.01
FOXN3-219ENST00000615335 TEX11Q8IYF3 940 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 MNS1Q8NEH6 495 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 ZDHHC15Q96MV8 337 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 DEF6Q9H4E7 631 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 PCDHAC2Q9Y5I4 1007 aa15□□□□□ -0.01
FOXN3-219ENST00000615335 ZNF213O14771 459 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 SLU7O95391 586 aaKnown RBP14.99□□□□□ -0.01
FOXN3-219ENST00000615335 H2AFXP16104 143 aaPredicted RBP14.99□□□□□ -0.01
FOXN3-219ENST00000615335 CAMK4Q16566 473 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 ZSCAN26Q16670 478 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 CT47A1Q5JQC4 288 aaPredicted RBP14.99□□□□□ -0.01
FOXN3-219ENST00000615335 CCDC91Q7Z6B0 441 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 FAM200AQ8TCP9 573 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 TGFBRAP1Q8WUH2 860 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 LEO1Q8WVC0 666 aaPredicted RBP14.99□□□□□ -0.01
FOXN3-219ENST00000615335 GTF3C6Q969F1 213 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
FOXN3-219ENST00000615335 BAZ2AQ9UIF9 1905 aaKnown RBP14.98□□□□□ -0.01
FOXN3-219ENST00000615335 TYRO3Q06418 890 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 ALX1Q15699 326 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 CFAP100Q494V2 611 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 APOBEC3HQ6NTF7 200 aaKnown RBP14.98□□□□□ -0.01
FOXN3-219ENST00000615335 SRLQ86TD4 932 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 GOLGA5Q8TBA6 731 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 TNMDQ9H2S6 317 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 DCP1AQ9NPI6 582 aaPredicted RBP14.98□□□□□ -0.01
FOXN3-219ENST00000615335 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 USP40Q9NVE5 1235 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 DACT1Q9NYF0 836 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 FHOD1Q9Y613 1164 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 RHBDL3P58872 404 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 ELF2Q15723 593 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 TTC31Q49AM3 519 aaPredicted RBP14.98□□□□□ -0.01
FOXN3-219ENST00000615335 Q6ZUG5 572 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 TMX1Q9H3N1 280 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 DDX19AQ9NUU7 478 aaKnown RBP14.98□□□□□ -0.01
FOXN3-219ENST00000615335 DONSONQ9NYP3 566 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 MRVI1Q9Y6F6 885 aa14.98□□□□□ -0.01
FOXN3-219ENST00000615335 KIF2AO00139 706 aaPredicted RBP14.97□□□□□ -0.01
FOXN3-219ENST00000615335 ATP8B1O43520 1251 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 JAK2O60674 1132 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 RPS12P25398 132 aaKnown RBP14.97□□□□□ -0.01
FOXN3-219ENST00000615335 SATB1Q01826 763 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 MAPKAPK5Q8IW41 473 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 ZMYM6O95789 1325 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 MINDY4BA8MYZ0 360 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 ATP2B1P20020 1258 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 GMPSP49915 693 aaPredicted RBP14.97□□□□□ -0.01
FOXN3-219ENST00000615335 CDC42EP5Q6NZY7 148 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 FBXO18Q8NFZ0 1043 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 MCM9Q9NXL9 1143 aa14.97□□□□□ -0.01
FOXN3-219ENST00000615335 PICALMQ13492 652 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 DLGAP5Q15398 846 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 CKAP2LQ8IYA6 745 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 IQUBQ8NA54 791 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 BRF1Q92994 677 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 PRMT6Q96LA8 375 aaPredicted RBP14.96□□□□□ -0.01
FOXN3-219ENST00000615335 CLSTN2Q9H4D0 955 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 RRP15Q9Y3B9 282 aaKnown RBP14.96□□□□□ -0.01
FOXN3-219ENST00000615335 USP17L12C9JPN9 530 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 USP17L21D6R901 530 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 H3BQV1 296 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 TRIM66O15016 1216 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 NEMFO60524 1076 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 PNMA6AP0CW24 399 aaPredicted RBP14.96□□□□□ -0.01
FOXN3-219ENST00000615335 RESTQ13127 1097 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 IFFO2Q5TF58 517 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 CCDC186Q7Z3E2 898 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 GPC2Q8N158 579 aa14.96□□□□□ -0.01
FOXN3-219ENST00000615335 ARGLU1Q9NWB6 273 aaPredicted RBP14.96□□□□□ -0.01
FOXN3-219ENST00000615335 CDK5RAP2Q96SN8 1893 aa14.96□□□□□ -0.02
FOXN3-219ENST00000615335 SHTN1A0MZ66 631 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 SLC4A8Q2Y0W8 1093 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 STK11IPQ8N1F8 1099 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 BICD2Q8TD16 824 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 DPF2Q92785 391 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 TDRD3Q9H7E2 651 aaKnown RBP14.95□□□□□ -0.02
FOXN3-219ENST00000615335 E7EWF7 191 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 MAGEA9P43362 315 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
FOXN3-219ENST00000615335 GYS2P54840 703 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms