RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 LY9Q9HBG7 655 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 PDE11AQ9HCR9 933 aa14.17□□□□□ -0.14
MSH6-213ENST00000614496 G3V3G9 751 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 H0YHG0 523 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 CLSTN1O94985 981 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 KRT18P05783 430 aaKnown RBP14.16□□□□□ -0.14
MSH6-213ENST00000614496 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 ENOX1Q8TC92 643 aaKnown RBP14.16□□□□□ -0.14
MSH6-213ENST00000614496 MCM9Q9NXL9 1143 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 AKR1B10O60218 316 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 CRNKL1Q9BZJ0 848 aaKnown RBP14.16□□□□□ -0.14
MSH6-213ENST00000614496 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 USP17L12C9JPN9 530 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 USP17L21D6R901 530 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 SLFN14P0C7P3 912 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 HNRNPH2P55795 449 aaKnown RBP14.16□□□□□ -0.14
MSH6-213ENST00000614496 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 DNAJC21Q5F1R6 531 aaKnown RBP14.16□□□□□ -0.14
MSH6-213ENST00000614496 PSMB7Q99436 277 aa14.16□□□□□ -0.14
MSH6-213ENST00000614496 TTF2Q9UNY4 1162 aaKnown RBP14.16□□□□□ -0.14
MSH6-213ENST00000614496 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 ENC1O14682 589 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.15□□□□□ -0.14
MSH6-213ENST00000614496 AATFQ9NY61 560 aaKnown RBP eCLIP14.15□□□□□ -0.14
MSH6-213ENST00000614496 PTPREP23469 700 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 CYP26C1Q6V0L0 522 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 DTHD1Q6ZMT9 781 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 FCHSD1Q86WN1 690 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 TMTC1Q8IUR5 882 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 CRACR2BQ8N4Y2 399 aaPredicted RBP14.15□□□□□ -0.14
MSH6-213ENST00000614496 RABGGTAQ92696 567 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 EXOC1Q9NV70 894 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 MYO1BO43795 1136 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 CYLC1P35663 651 aaPredicted RBP14.15□□□□□ -0.14
MSH6-213ENST00000614496 NCAPHQ15003 741 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 FOXP1Q9H334 677 aaPredicted RBP14.15□□□□□ -0.14
MSH6-213ENST00000614496 TMEM94Q12767 1356 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 USO1O60763 962 aaKnown RBP14.15□□□□□ -0.14
MSH6-213ENST00000614496 ZNF652Q9Y2D9 606 aa14.15□□□□□ -0.14
MSH6-213ENST00000614496 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 TADA3O75528 432 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 DYNLL1P63167 89 aaKnown RBP14.14□□□□□ -0.15
MSH6-213ENST00000614496 IQCEQ6IPM2 695 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 TFCP2L1Q9NZI6 479 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 ANKIB1Q9P2G1 1089 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 SRGAP1Q7Z6B7 1085 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 TRIML1Q8N9V2 468 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 RGS22Q8NE09 1264 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 PIGBQ92521 554 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 ISCA1Q9BUE6 129 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 KRT86O43790 486 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 LIFRP42702 1097 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 CASP7P55210 303 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 MORC3Q14149 939 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 AGXT2Q9BYV1 514 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 CDC23Q9UJX2 597 aa14.14□□□□□ -0.15
MSH6-213ENST00000614496 KCNJ18B7U540 433 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 CALM1P0DP23 149 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 CALM2P0DP24 149 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 CALM3P0DP25 149 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 KCNJ12Q14500 433 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 CC2D1AQ6P1N0 951 aaPredicted RBP14.13□□□□□ -0.15
MSH6-213ENST00000614496 RASGRP4Q8TDF6 673 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 FERMT2Q96AC1 680 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 CCDC42Q96M95 316 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 SRPRBQ9Y5M8 271 aaKnown RBP14.13□□□□□ -0.15
MSH6-213ENST00000614496 ZMYND10O75800 440 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 PPARDQ03181 441 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 ZSCAN10Q96SZ4 725 aaPredicted RBP14.13□□□□□ -0.15
MSH6-213ENST00000614496 TSPYL1Q9H0U9 437 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 SEC63Q9UGP8 760 aaKnown RBP14.13□□□□□ -0.15
MSH6-213ENST00000614496 PLEKHA8P1O95397 391 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 PAFAH1B1P43034 410 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 KIF5AQ12840 1032 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 IGDCC4Q8TDY8 1250 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 GPKOWQ92917 476 aaPredicted RBP eCLIP14.13□□□□□ -0.151e-10■■□□□ 11.7
MSH6-213ENST00000614496 AKAP12Q02952 1782 aa14.13□□□□□ -0.15
MSH6-213ENST00000614496 ERCC5P28715 1186 aaPredicted RBP14.12□□□□□ -0.15
MSH6-213ENST00000614496 LETM2Q2VYF4 491 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 PYM1Q9BRP8 204 aaKnown RBP14.12□□□□□ -0.15
MSH6-213ENST00000614496 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.12□□□□□ -0.15
MSH6-213ENST00000614496 KDM6AO15550 1401 aaPredicted RBP14.12□□□□□ -0.15
MSH6-213ENST00000614496 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 BRD3Q15059 726 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 PAGE5Q96GU1 130 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 PLEKHA4Q9H4M7 779 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 RBM28Q9NW13 759 aaKnown RBP14.12□□□□□ -0.15
MSH6-213ENST00000614496 RIPOR2Q9Y4F9 1068 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
MSH6-213ENST00000614496 ARID5AQ03989 594 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 CSGALNACT2Q8N6G5 542 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 WDR17Q8IZU2 1322 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
MSH6-213ENST00000614496 NAPAP54920 295 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms