RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 CLNS1AP54105 237 aaKnown RBP9.8□□□□□ -0.84
PDE6A-204ENST00000613228 SATB1Q01826 763 aa9.8□□□□□ -0.84
PDE6A-204ENST00000613228 SNW1Q13573 536 aaKnown RBP9.8□□□□□ -0.84
PDE6A-204ENST00000613228 IFI16Q16666 785 aaKnown RBP9.8□□□□□ -0.84
PDE6A-204ENST00000613228 HAUS3Q68CZ6 603 aa9.8□□□□□ -0.84
PDE6A-204ENST00000613228 CCDC50Q8IVM0 306 aa9.8□□□□□ -0.84
PDE6A-204ENST00000613228 FANCBQ8NB91 859 aa9.8□□□□□ -0.84
PDE6A-204ENST00000613228 RNF26Q9BY78 433 aaPredicted RBP9.8□□□□□ -0.84
PDE6A-204ENST00000613228 SPATS2LQ9NUQ6 558 aaKnown RBP9.8□□□□□ -0.84
PDE6A-204ENST00000613228 SAP30BPQ9UHR5 308 aaKnown RBP9.8□□□□□ -0.84
PDE6A-204ENST00000613228 JRKLQ9Y4A0 524 aa9.8□□□□□ -0.84
PDE6A-204ENST00000613228 NRXN3Q9Y4C0 1643 aa9.8□□□□□ -0.84
PDE6A-204ENST00000613228 IBSPP21815 317 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 RXRBP28702 533 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 LIFRP42702 1097 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 GYG1P46976 350 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 ZSCAN26Q16670 478 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 RNF187Q5TA31 235 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 MYSM1Q5VVJ2 828 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 C2CD5Q86YS7 1000 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 DHX58Q96C10 678 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 ALS2CR12Q96Q35 445 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 FOXP1Q9H334 677 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 V9GY48 417 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 BIN1O00499 593 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 EBAG9O00559 213 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 SH2B2O14492 632 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 PPP6R2O75170 966 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 CSF1RP07333 972 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 MFSD14BQ5SR56 506 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 EDC3Q96F86 508 aaKnown RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 CCDC17Q96LX7 622 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 RTEL1Q9NZ71 1219 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 MEGF6O75095 1541 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 STK36Q9NRP7 1315 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 CYP21A2P08686 494 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 MCM7P33993 719 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 SV2BQ7L1I2 683 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 NIM1KQ8IY84 436 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 ZNF34Q8IZ26 560 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 TRIML1Q8N9V2 468 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 GOLGA5Q8TBA6 731 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 LOC102724159A0A0B4J2E5 919 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 NBPF26B4DH59 902 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 PPP2R5AQ15172 486 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 PWP2Q15269 919 aaKnown RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 NBPF10Q6P3W6 841 aaKnown RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 CLEC17AQ6ZS10 378 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 ZNF589Q86UQ0 364 aaPredicted RBP9.79□□□□□ -0.84
PDE6A-204ENST00000613228 NOSTRINQ8IVI9 506 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 NBPF15Q8N660 670 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 CEP112Q8N8E3 955 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 ZKSCAN3Q9BRR0 538 aa9.79□□□□□ -0.84
PDE6A-204ENST00000613228 TFAP4Q01664 338 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 TNFAIP1Q13829 316 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 NAA25Q14CX7 972 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 EPHA10Q5JZY3 1008 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 CNNM4Q6P4Q7 775 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 TGFBRAP1Q8WUH2 860 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 STAG1Q8WVM7 1258 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 NCOA5Q9HCD5 579 aaKnown RBP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 BTDP43251 543 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 EIF6P56537 245 aaKnown RBP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 ASIC1P78348 528 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 SCRN1Q12765 414 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 PDIA6Q15084 440 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 RASEFQ8IZ41 740 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 COA1Q9GZY4 146 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 N4BP3O15049 544 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 DKC1O60832 514 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 URI1O94763 535 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 CMA1P23946 247 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 HLFQ16534 295 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 FAM177A1Q8N128 213 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 SEC62Q99442 399 aaKnown RBP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 NDUFB9Q9Y6M9 179 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 TNKSO95271 1327 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 CYLC1P35663 651 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 COL5A2P05997 1499 aaPredicted RBP9.78□□□□□ -0.84
PDE6A-204ENST00000613228 CCDC65Q8IXS2 484 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 USP40Q9NVE5 1235 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 POLR3EQ9NVU0 708 aa9.78□□□□□ -0.84
PDE6A-204ENST00000613228 PNPLA7Q6ZV29 1317 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 KDM3AQ9Y4C1 1321 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.84
PDE6A-204ENST00000613228 USP17L12C9JPN9 530 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 USP17L21D6R901 530 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 JAK2O60674 1132 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 AFMP43652 599 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 ASPRV1Q53RT3 343 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 SH3GLB2Q9NR46 395 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 TMEM51Q9NW97 253 aa9.77□□□□□ -0.84
PDE6A-204ENST00000613228 AFF2P51816 1311 aa9.77□□□□□ -0.85
PDE6A-204ENST00000613228 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-204ENST00000613228 NSUN7Q8NE18 718 aaKnown RBP9.77□□□□□ -0.85
PDE6A-204ENST00000613228 RXRAP19793 462 aa9.77□□□□□ -0.85
PDE6A-204ENST00000613228 OSBP2Q969R2 916 aa9.77□□□□□ -0.85
PDE6A-204ENST00000613228 GJD4Q96KN9 370 aaPredicted RBP9.77□□□□□ -0.85
PDE6A-204ENST00000613228 VEZTQ9HBM0 779 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms