RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 INTS5Q6P9B9 1019 aaKnown RBP12.3□□□□□ -0.44
FAM3A-221ENST00000612856 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 MTX1Q13505 466 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 ME3Q16798 604 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 CERKLQ49MI3 558 aaPredicted RBP12.3□□□□□ -0.44
FAM3A-221ENST00000612856 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
FAM3A-221ENST00000612856 SECISBP2LQ93073 1101 aaKnown RBP12.3□□□□□ -0.44
FAM3A-221ENST00000612856 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
FAM3A-221ENST00000612856 CSADQ9Y600 493 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 NCAPD2Q15021 1401 aa12.3□□□□□ -0.44
FAM3A-221ENST00000612856 IPO7O95373 1038 aaKnown RBP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 CLEC10AQ8IUN9 316 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 GPIHBP1Q8IV16 184 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 CNNM3Q8NE01 707 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 GPKOWQ92917 476 aaPredicted RBP eCLIP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 SEPT11Q9NVA2 429 aaKnown RBP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 BSDC1Q9NW68 430 aaPredicted RBP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 BACH1O14867 736 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 SEC31AO94979 1220 aaKnown RBP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 PDGFDQ9GZP0 370 aaPredicted RBP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 ALAS1P13196 640 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 GYS1P13807 737 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 CAPN2P17655 700 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 SFPQP23246 707 aaKnown RBP eCLIP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 CT47A1Q5JQC4 288 aaPredicted RBP12.29□□□□□ -0.44
FAM3A-221ENST00000612856 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 EEPD1Q7L9B9 569 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 CPLX3Q8WVH0 158 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 AOX1Q06278 1338 aa12.29□□□□□ -0.44
FAM3A-221ENST00000612856 CYP21A2P08686 494 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TCERG1LQ5VWI1 586 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TMC6Q7Z403 805 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 FBXO41Q8TF61 875 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 RRP36Q96EU6 259 aaKnown RBP12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TPCN1Q9ULQ1 816 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 MAST3O60307 1309 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 USP27XA6NNY8 438 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 PPP1R12BO60237 982 aaPredicted RBP12.28□□□□□ -0.44
FAM3A-221ENST00000612856 ECE2O60344 883 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 ZNF75DP51815 510 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 PIK3AP1Q6ZUJ8 805 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 UBN2Q6ZU65 1347 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TNIP1Q15025 636 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TCP11L1Q9NUJ3 509 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 MORC2Q9Y6X9 1032 aaPredicted RBP12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TNKSO95271 1327 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 FOXO4P98177 505 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TXNRD3Q86VQ6 643 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 BEGAINQ9BUH8 593 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 GJB4Q9NTQ9 266 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 TMOD4Q9NZQ9 345 aa12.28□□□□□ -0.44
FAM3A-221ENST00000612856 H0YHG0 523 aa12.27□□□□□ -0.44
FAM3A-221ENST00000612856 AP5Z1O43299 807 aa12.27□□□□□ -0.44
FAM3A-221ENST00000612856 RPS6KB1P23443 525 aa12.27□□□□□ -0.44
FAM3A-221ENST00000612856 TMTC2Q8N394 836 aa12.27□□□□□ -0.44
FAM3A-221ENST00000612856 BRIP1Q9BX63 1249 aa12.27□□□□□ -0.44
FAM3A-221ENST00000612856 MAPK8IP1Q9UQF2 711 aa12.27□□□□□ -0.44
FAM3A-221ENST00000612856 FLOT1O75955 427 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 CALML3P27482 149 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 ICA1Q05084 483 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 PGBD1Q96JS3 809 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 FAM84BQ96KN1 310 aaPredicted RBP12.27□□□□□ -0.45
FAM3A-221ENST00000612856 FEZ2Q9UHY8 353 aaPredicted RBP12.27□□□□□ -0.45
FAM3A-221ENST00000612856 NMT2O60551 498 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 OAS2P29728 719 aaKnown RBP12.27□□□□□ -0.45
FAM3A-221ENST00000612856 MNAT1P51948 309 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 PNMA1Q8ND90 353 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 SH3RF3Q8TEJ3 882 aaPredicted RBP12.27□□□□□ -0.45
FAM3A-221ENST00000612856 DHX58Q96C10 678 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 VPS18Q9P253 973 aa12.27□□□□□ -0.45
FAM3A-221ENST00000612856 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
FAM3A-221ENST00000612856 CARMIL3Q8ND23 1372 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 VWA3AA6NCI4 1184 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 TTC31Q49AM3 519 aaPredicted RBP12.26□□□□□ -0.45
FAM3A-221ENST00000612856 MAGEC2Q9UBF1 373 aaPredicted RBP12.26□□□□□ -0.45
FAM3A-221ENST00000612856 IVNS1ABPQ9Y6Y0 642 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 TMEM232C9JQI7 657 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 HARSP12081 509 aaKnown RBP12.26□□□□□ -0.45
FAM3A-221ENST00000612856 FAM193AP78312 1265 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 TMEM266Q2M3C6 531 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 RASGRP4Q8TDF6 673 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 INTS4Q96HW7 963 aaKnown RBP12.26□□□□□ -0.45
FAM3A-221ENST00000612856 EPC1Q9H2F5 836 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 CNGA1P29973 690 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 CA8P35219 290 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 TCHPQ9BT92 498 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms