RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 CYP2D6P10635 497 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 HDLBPQ00341 1268 aaKnown RBP10.43□□□□□ -0.74
CCDC47-207ENST00000612558 WTAPQ15007 396 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-207ENST00000612558 APOA5Q6Q788 366 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-207ENST00000612558 TEKT1Q969V4 418 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 UBAC1Q9BSL1 405 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 MXD3Q9BW11 206 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 MTMR6Q9Y217 621 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 KIF3AQ9Y496 699 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 ATP6V1DQ9Y5K8 247 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 SLC12A7Q9Y666 1083 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 CPLX1O14810 134 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 ZBTB43O43298 467 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 RANBP6O60518 1105 aaKnown RBP10.43□□□□□ -0.74
CCDC47-207ENST00000612558 POLR3DP05423 398 aaPredicted RBP10.43□□□□□ -0.74
CCDC47-207ENST00000612558 DALRD3Q5D0E6 543 aaKnown RBP10.43□□□□□ -0.74
CCDC47-207ENST00000612558 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 IQCA1Q86XH1 822 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 MAPKAPK5Q8IW41 473 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 FAM184AQ8NB25 1140 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 NCOA5Q9HCD5 579 aaKnown RBP10.43□□□□□ -0.74
CCDC47-207ENST00000612558 CD2APQ9Y5K6 639 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 LAMB1P07942 1786 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 SCN9AQ15858 1988 aa10.43□□□□□ -0.74
CCDC47-207ENST00000612558 ROBO3Q96MS0 1386 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 PTPDC1A2A3K4 754 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 SPDYE16A6NNV3 312 aaPredicted RBP10.42□□□□□ -0.74
CCDC47-207ENST00000612558 DTNBO60941 627 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 PRDM1O75626 825 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 F13A1P00488 732 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 METAP2P50579 478 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCDC47-207ENST00000612558 SCNN1DP51172 638 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 RCAN1P53805 252 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 MCTP1Q6DN14 999 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 LARGE2Q8N3Y3 721 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 DDX11Q96FC9 970 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 ZDHHC15Q96MV8 337 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 ZSCAN10Q96SZ4 725 aaPredicted RBP10.42□□□□□ -0.74
CCDC47-207ENST00000612558 ZKSCAN3Q9BRR0 538 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 ZNF287Q9HBT7 754 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 SENP2Q9HC62 589 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 CDK5RAP2Q96SN8 1893 aa10.42□□□□□ -0.74
CCDC47-207ENST00000612558 FLT1P17948 1338 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 VPS37CA5D8V6 355 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-207ENST00000612558 YDJCA8MPS7 323 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 CDKL5O76039 1030 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 CRKP46108 304 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 SEC23AQ15436 765 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 SKOR2Q2VWA4 1001 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-207ENST00000612558 APOBEC3HQ6NTF7 200 aaKnown RBP10.41□□□□□ -0.74
CCDC47-207ENST00000612558 CPLX2Q6PUV4 134 aaKnown RBP10.41□□□□□ -0.74
CCDC47-207ENST00000612558 KIAA0825Q8IV33 1275 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 MKNK2Q9HBH9 465 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 USP40Q9NVE5 1235 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 PPP1R1BQ9UD71 204 aaPredicted RBP10.41□□□□□ -0.74
CCDC47-207ENST00000612558 SAP30BPQ9UHR5 308 aaKnown RBP10.41□□□□□ -0.74
CCDC47-207ENST00000612558 NAV1Q8NEY1 1877 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 TNKSO95271 1327 aa10.41□□□□□ -0.74
CCDC47-207ENST00000612558 TSPY2A6NKD2 308 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 H3BQV1 296 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 TRAK2O60296 914 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 ADD1P35611 737 aaKnown RBP10.4□□□□□ -0.74
CCDC47-207ENST00000612558 PLCD1P51178 756 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 PPP2R5BQ15173 497 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 CDC42EP5Q6NZY7 148 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 MICU3Q86XE3 530 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 RAB11FIP4Q86YS3 637 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 ENAHQ8N8S7 591 aaPredicted RBP10.4□□□□□ -0.74
CCDC47-207ENST00000612558 ZNF277Q9NRM2 450 aaPredicted RBP10.4□□□□□ -0.74
CCDC47-207ENST00000612558 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 MYO3BQ8WXR4 1341 aa10.4□□□□□ -0.74
CCDC47-207ENST00000612558 MYH1P12882 1939 aa10.4□□□□□ -0.75
CCDC47-207ENST00000612558 NID2Q14112 1375 aa10.4□□□□□ -0.75
CCDC47-207ENST00000612558 FOCADQ5VW36 1801 aa10.4□□□□□ -0.75
CCDC47-207ENST00000612558 CCDC196A0A1B0GTZ2 297 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 GOLGA8AA7E2F4 631 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 CDC27P30260 824 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 IARSP41252 1262 aaKnown RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 CCDC178Q5BJE1 867 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 FAM47AQ5JRC9 791 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 IFIT1BQ5T764 474 aaKnown RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 C16orf86Q6ZW13 317 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 CDC37L1Q7L3B6 337 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 TTC6Q86TZ1 520 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 ZNF444Q8N0Y2 327 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 RGS22Q8NE09 1264 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 DYNLL2Q96FJ2 89 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 ZNF646O15015 1829 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 VIL1P09327 827 aaKnown RBP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 CALM1P0DP23 149 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 CALM2P0DP24 149 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 CALM3P0DP25 149 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 RXRAP19793 462 aa10.39□□□□□ -0.75
CCDC47-207ENST00000612558 RBM5P52756 815 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC47-207ENST00000612558 TFAP4Q01664 338 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms