RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CCL15Q16663 113 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 IFNL1Q8IU54 200 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 SLC44A5Q8NCS7 719 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 ZNF280CQ8ND82 737 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 WDR18Q9BV38 432 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 DSCC1Q9BVC3 393 aa10.45□□□□□ -0.74
SMAD4-217ENST00000611848 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
SMAD4-217ENST00000611848 A0A0G2JLL6 359 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 SMIM22K7EJ46 135 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 K7ELQ4 463 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 CD2BP2O95400 341 aaKnown RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 PDE4BQ07343 736 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 TMEM179Q6ZVK1 233 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 FASTKD5Q7L8L6 764 aaKnown RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 PRRT2Q7Z6L0 340 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 BRI3BPQ8WY22 251 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 MKNK2Q9HBH9 465 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 ZCCHC17Q9NP64 241 aaKnown RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 RNF186Q9NXI6 227 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 ANAPC4Q9UJX5 808 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 TRIM75PA6NK02 468 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 IGF2BP3O00425 579 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 SGSM2O43147 1006 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 EPB41L2O43491 1005 aaKnown RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 JAG1P78504 1218 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 SPP2Q13103 211 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 GSE1Q14687 1217 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 RAB3GAP1Q15042 981 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 CCDC84Q86UT8 332 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-217ENST00000611848 SPRYD3Q8NCJ5 442 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 PTPN18Q99952 460 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 ESYT1Q9BSJ8 1104 aa10.44□□□□□ -0.74
SMAD4-217ENST00000611848 C19orf81C9J6K1 198 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 USP17L10C9JJH3 530 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 TRPA1O75762 1119 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 AKR1B1P15121 316 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 GUCY1A2P33402 732 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 CTCFP49711 727 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-217ENST00000611848 BACE1P56817 501 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 SHROOM1Q2M3G4 852 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-217ENST00000611848 SH3D19Q5HYK7 790 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 ANKRD23Q86SG2 305 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 ZNF444Q8N0Y2 327 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-217ENST00000611848 PROCA1Q8NCQ7 364 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-217ENST00000611848 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 IL17RAQ96F46 866 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 CFHR5Q9BXR6 569 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 IL25Q9H293 177 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 CTNNA3Q9UI47 895 aa10.43□□□□□ -0.74
SMAD4-217ENST00000611848 BTBD19C9JJ37 291 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 FOXN1O15353 648 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 FGRP09769 529 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 PCP11498 1178 aaKnown RBP10.42□□□□□ -0.74
SMAD4-217ENST00000611848 RASA1P20936 1047 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 USP14P54578 494 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 SEPT2Q15019 361 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 STK11IPQ8N1F8 1099 aa10.42□□□□□ -0.74
SMAD4-217ENST00000611848 GREB1LQ9C091 1923 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-217ENST00000611848 ZNF213O14771 459 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 PRDM1O75626 825 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 NT5C2P49902 561 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 HMGCS2P54868 508 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 MTMR2Q13614 643 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 MOGSQ13724 837 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 IMMTQ16891 758 aaKnown RBP10.41□□□□□ -0.74
SMAD4-217ENST00000611848 GADL1Q6ZQY3 521 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 KIAA1211Q6ZU35 1233 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 FAM43AQ8N2R8 423 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 RNF41Q9H4P4 317 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-217ENST00000611848 KANSL2Q9H9L4 492 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 TMOD4Q9NZQ9 345 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMAD4-217ENST00000611848 SLC45A1Q9Y2W3 748 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
SMAD4-217ENST00000611848 LOC285556D6RIA3 1793 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 ORC4O43929 436 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 ECM2O94769 699 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-217ENST00000611848 TSPY3P0CV98 308 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 TSPY8P0CW00 308 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 HSPA8P11142 646 aaKnown RBP10.4□□□□□ -0.74
SMAD4-217ENST00000611848 MCM4P33991 863 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 HAND2P61296 217 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 ICA1Q05084 483 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 PABPC4Q13310 644 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMAD4-217ENST00000611848 TAF1CQ15572 869 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-217ENST00000611848 NOM1Q5C9Z4 860 aaKnown RBP10.4□□□□□ -0.74
SMAD4-217ENST00000611848 AKNAD1Q5T1N1 836 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 GPAT2Q6NUI2 795 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 USP17L2Q6R6M4 530 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 MFSD6Q6ZSS7 791 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 NEDD1Q8NHV4 660 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 STAG1Q8WVM7 1258 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 C12orf42Q96LP6 360 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 FEZ1Q99689 392 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 KIAA1683Q9H0B3 1180 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 SH2D4AQ9H788 454 aa10.4□□□□□ -0.74
SMAD4-217ENST00000611848 ZFYVE28Q9HCC9 887 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms