RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ROBO3Q96MS0 1386 aa31.06■■■□□ 2.56
VEGFA-226ENST00000611736 C17orf99Q6UX52 265 aa31.06■■■□□ 2.56
VEGFA-226ENST00000611736 ZNF589Q86UQ0 364 aaPredicted RBP31.06■■■□□ 2.56
VEGFA-226ENST00000611736 CCDC17Q96LX7 622 aa31.06■■■□□ 2.56
VEGFA-226ENST00000611736 DIAPH3Q9NSV4 1193 aa31.06■■■□□ 2.56
VEGFA-226ENST00000611736 USP17L2Q6R6M4 530 aa31.05■■■□□ 2.56
VEGFA-226ENST00000611736 CENPQQ7L2Z9 268 aaPredicted RBP31.05■■■□□ 2.56
VEGFA-226ENST00000611736 MKNK2Q9HBH9 465 aa31.05■■■□□ 2.56
VEGFA-226ENST00000611736 EMILIN3Q9NT22 766 aa31.05■■■□□ 2.56
VEGFA-226ENST00000611736 PNMA3Q9UL41 463 aa31.05■■■□□ 2.56
VEGFA-226ENST00000611736 PABPC4Q13310 644 aaKnown RBP eCLIP31.04■■■□□ 2.566e-13■■■■■ 112.3
VEGFA-226ENST00000611736 CLEC10AQ8IUN9 316 aa31.04■■■□□ 2.56
VEGFA-226ENST00000611736 SMCR8Q8TEV9 937 aaPredicted RBP31.04■■■□□ 2.56
VEGFA-226ENST00000611736 TRIM17Q9Y577 477 aa31.04■■■□□ 2.56
VEGFA-226ENST00000611736 CCDC171Q6TFL3 1326 aa31.03■■■□□ 2.56
VEGFA-226ENST00000611736 CENPBP07199 599 aaPredicted RBP31.03■■■□□ 2.56
VEGFA-226ENST00000611736 CAP1Q01518 475 aa31.03■■■□□ 2.56
VEGFA-226ENST00000611736 CWC27Q6UX04 472 aaKnown RBP31.03■■■□□ 2.56
VEGFA-226ENST00000611736 HIP1O00291 1037 aa31.02■■■□□ 2.56
VEGFA-226ENST00000611736 ECM2O94769 699 aaPredicted RBP31.02■■■□□ 2.56
VEGFA-226ENST00000611736 OSBPP22059 807 aa31.02■■■□□ 2.56
VEGFA-226ENST00000611736 PPARAQ07869 468 aa31.02■■■□□ 2.56
VEGFA-226ENST00000611736 KIAA1683Q9H0B3 1180 aa31.02■■■□□ 2.56
VEGFA-226ENST00000611736 ASCC2Q9H1I8 757 aaPredicted RBP31.02■■■□□ 2.56
VEGFA-226ENST00000611736 PRDM1O75626 825 aa31.01■■■□□ 2.55
VEGFA-226ENST00000611736 RASA1P20936 1047 aa31.01■■■□□ 2.55
VEGFA-226ENST00000611736 USP14P54578 494 aa31.01■■■□□ 2.55
VEGFA-226ENST00000611736 ICA1Q05084 483 aa31.01■■■□□ 2.55
VEGFA-226ENST00000611736 OTOP1Q7RTM1 612 aa31.01■■■□□ 2.55
VEGFA-226ENST00000611736 EFCC1Q9HA90 598 aa31.01■■■□□ 2.55
VEGFA-226ENST00000611736 ZSWIM8A7E2V4 1837 aa31.01■■■□□ 2.55
VEGFA-226ENST00000611736 A0A1W2PRG0 241 aa31■■■□□ 2.55
VEGFA-226ENST00000611736 BCRP11274 1271 aa31■■■□□ 2.55
VEGFA-226ENST00000611736 IRX3P78415 501 aaPredicted RBP31■■■□□ 2.55
VEGFA-226ENST00000611736 LACTBP83111 547 aaPredicted RBP31■■■□□ 2.55
VEGFA-226ENST00000611736 CCDC136Q96JN2 1154 aa31■■■□□ 2.55
VEGFA-226ENST00000611736 ARHGAP39Q9C0H5 1083 aa31■■■□□ 2.55
VEGFA-226ENST00000611736 HTTP42858 3142 aa30.99■■■□□ 2.55
VEGFA-226ENST00000611736 CCDC85CA6NKD9 419 aa30.99■■■□□ 2.55
VEGFA-226ENST00000611736 SLC3A2P08195 630 aaKnown RBP30.99■■■□□ 2.55
VEGFA-226ENST00000611736 HSPD1P10809 573 aaKnown RBP30.99■■■□□ 2.55
VEGFA-226ENST00000611736 MFAP1P55081 439 aaKnown RBP30.99■■■□□ 2.55
VEGFA-226ENST00000611736 KIF22Q14807 665 aa30.99■■■□□ 2.55
VEGFA-226ENST00000611736 PKN2Q16513 984 aaKnown RBP30.99■■■□□ 2.55
VEGFA-226ENST00000611736 C12orf42Q96LP6 360 aa30.99■■■□□ 2.55
VEGFA-226ENST00000611736 ZNF287Q9HBT7 754 aa30.99■■■□□ 2.55
VEGFA-226ENST00000611736 ATP2B2Q01814 1243 aa30.98■■■□□ 2.55
VEGFA-226ENST00000611736 ALX1Q15699 326 aa30.98■■■□□ 2.55
VEGFA-226ENST00000611736 ARHGEF10LQ9HCE6 1279 aa30.98■■■□□ 2.55
VEGFA-226ENST00000611736 HOXA7P31268 230 aaPredicted RBP30.97■■■□□ 2.55
VEGFA-226ENST00000611736 CTDSPL2Q05D32 466 aa30.97■■■□□ 2.55
VEGFA-226ENST00000611736 PDE4BQ07343 736 aa30.97■■■□□ 2.55
VEGFA-226ENST00000611736 SKAP1Q86WV1 359 aa30.97■■■□□ 2.55
VEGFA-226ENST00000611736 SIAH1Q8IUQ4 282 aa30.97■■■□□ 2.55
VEGFA-226ENST00000611736 ZNF444Q8N0Y2 327 aaPredicted RBP30.97■■■□□ 2.55
VEGFA-226ENST00000611736 FGAP02671 866 aa30.96■■■□□ 2.55
VEGFA-226ENST00000611736 VCAM1P19320 739 aa30.96■■■□□ 2.55
VEGFA-226ENST00000611736 ARHGEF6Q15052 776 aa30.96■■■□□ 2.55
VEGFA-226ENST00000611736 ANKRD13CQ8N6S4 541 aa30.96■■■□□ 2.55
VEGFA-226ENST00000611736 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.96■■■□□ 2.55
VEGFA-226ENST00000611736 KANSL2Q9H9L4 492 aa30.96■■■□□ 2.55
VEGFA-226ENST00000611736 GREB1LQ9C091 1923 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-226ENST00000611736 FBXO46Q6PJ61 603 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-226ENST00000611736 P2RX7Q99572 595 aaKnown RBP30.95■■■□□ 2.55
VEGFA-226ENST00000611736 EEF2P13639 858 aaKnown RBP30.94■■■□□ 2.54
VEGFA-226ENST00000611736 CTGFP29279 349 aa30.94■■■□□ 2.54
VEGFA-226ENST00000611736 PSMC4P43686 418 aa30.94■■■□□ 2.54
VEGFA-226ENST00000611736 SH2D4AQ9H788 454 aa30.94■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L15C9J2P7 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L13C9JLJ4 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L11C9JVI0 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L18D6R9N7 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L22D6RA61 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L17D6RBQ6 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L19D6RCP7 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L20D6RJB6 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 GCLCP48506 637 aaPredicted RBP30.93■■■□□ 2.54
VEGFA-226ENST00000611736 USP17L24Q0WX57 530 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 INCENPQ9NQS7 918 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 TMX2Q9Y320 296 aa30.93■■■□□ 2.54
VEGFA-226ENST00000611736 FMNL1O95466 1100 aaPredicted RBP30.92■■■□□ 2.54
VEGFA-226ENST00000611736 HERVK_113P62684 666 aa30.92■■■□□ 2.54
VEGFA-226ENST00000611736 KIAA1755Q5JYT7 1200 aa30.92■■■□□ 2.54
VEGFA-226ENST00000611736 TRIM47Q96LD4 638 aa30.92■■■□□ 2.54
VEGFA-226ENST00000611736 RPAP3Q9H6T3 665 aaPredicted RBP30.92■■■□□ 2.54
VEGFA-226ENST00000611736 ANAPC4Q9UJX5 808 aa30.92■■■□□ 2.54
VEGFA-226ENST00000611736 HPS5Q9UPZ3 1129 aa30.92■■■□□ 2.54
VEGFA-226ENST00000611736 PTPN22Q9Y2R2 807 aa30.92■■■□□ 2.54
VEGFA-226ENST00000611736 ZMYM6O95789 1325 aa30.92■■■□□ 2.54
VEGFA-226ENST00000611736 HAND2P61296 217 aa30.91■■■□□ 2.54
VEGFA-226ENST00000611736 FAM110CQ1W6H9 321 aa30.91■■■□□ 2.54
VEGFA-226ENST00000611736 FAM47AQ5JRC9 791 aa30.91■■■□□ 2.54
VEGFA-226ENST00000611736 SPICE1Q8N0Z3 855 aa30.91■■■□□ 2.54
VEGFA-226ENST00000611736 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.91■■■□□ 2.542e-6■□□□□ 9
VEGFA-226ENST00000611736 MGAMO43451 1857 aa30.91■■■□□ 2.54
VEGFA-226ENST00000611736 CENPFP49454 3210 aa30.9■■■□□ 2.54
VEGFA-226ENST00000611736 TSPY3P0CV98 308 aa30.9■■■□□ 2.54
VEGFA-226ENST00000611736 TSPY8P0CW00 308 aa30.9■■■□□ 2.54
VEGFA-226ENST00000611736 CATSPERGQ6ZRH7 1159 aa30.9■■■□□ 2.54
VEGFA-226ENST00000611736 IL25Q9H293 177 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms