RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 KARSQ15046 597 aaKnown RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 SPA17Q15506 151 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 ELF2Q15723 593 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 MFSD14BQ5SR56 506 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 KIAA1328Q86T90 577 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 BLIDQ8IZY5 108 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 ENAHQ8N8S7 591 aaPredicted RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 SLC4A9Q96Q91 983 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 TUBE1Q9UJT0 475 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 TGFBRAP1Q8WUH2 860 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 SYMPKQ92797 1274 aaKnown RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 RRP36Q96EU6 259 aaKnown RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 DCP1AQ9NPI6 582 aaPredicted RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 EXOC1Q9NV70 894 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 GGA1Q9UJY5 639 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 SRPRBQ9Y5M8 271 aaKnown RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 STX10O60499 249 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 RPS6KA4O75676 772 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 NTSR2O95665 410 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 PARP1P09874 1014 aaKnown RBP7.21□□□□□ -1.26
SNX13-213ENST00000611725 FGFR2P21802 821 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 JAKMIP3Q5VZ66 844 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 TMTC3Q6ZXV5 915 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 GRAMD1CQ8IYS0 662 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 GBP3Q9H0R5 595 aa7.21□□□□□ -1.26
SNX13-213ENST00000611725 NRXN3Q9Y4C0 1643 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 CCT6AP40227 531 aaKnown RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 SF3B3Q15393 1217 aaKnown RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 SPATA1Q5VX52 437 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 OXER1Q8TDS5 423 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 TBC1D22AQ8WUA7 517 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 EPSTI1Q96J88 318 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 GTPBP4Q9BZE4 634 aaKnown RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 VPS16Q9H269 839 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 NARFQ9UHQ1 456 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 ADKP55263 362 aaKnown RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 FAM182BQ5T319 152 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 KRT25Q7Z3Z0 450 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 FAM114A1Q8IWE2 563 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 BLZF1Q9H2G9 400 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 PAK1Q13153 545 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 SYCP1Q15431 976 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 ERCC6LQ2NKX8 1250 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 VSTM4Q8IW00 320 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 TMOD2Q9NZR1 351 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 KLRF2D3W0D1 207 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 GUCY1A2P33402 732 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 ITPK1Q13572 414 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 INF2Q27J81 1249 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 RESP18Q5W5W9 173 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 CACNA2D4Q7Z3S7 1137 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 GPKOWQ92917 476 aaPredicted RBP eCLIP7.2□□□□□ -1.26
SNX13-213ENST00000611725 CCDC43Q96MW1 224 aaKnown RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 TAB2Q9NYJ8 693 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 SAP30BPQ9UHR5 308 aaKnown RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 CCDC66A2RUB6 948 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 CTAGE15A4D2H0 777 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 CLSTN1O94985 981 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 PLEKHA8P1O95397 391 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 CTAGE8P0CG41 777 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 CTAGE6Q86UF2 777 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 CTAGE4Q8IX94 777 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 REXO1Q8N1G1 1221 aaKnown RBP7.2□□□□□ -1.26
SNX13-213ENST00000611725 ARFGAP3Q9NP61 516 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 LRWD1Q9UFC0 647 aa7.2□□□□□ -1.26
SNX13-213ENST00000611725 EIF3JO75822 258 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 CDC25AP30304 524 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 UBXN1Q04323 297 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 TMTC1Q8IUR5 882 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 TXLNBQ8N3L3 684 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 DESI2Q9BSY9 194 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 CARD6Q9BX69 1037 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 DNAJC5Q9H3Z4 198 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 SALL1Q9NSC2 1324 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 GTPBP6O43824 516 aaPredicted RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 MECOMQ03112 1051 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 TBC1D8BQ0IIM8 1120 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 LZTS2Q9BRK4 669 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 FGFR1OPO95684 399 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 PTPN21Q16825 1174 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 USP49Q70CQ1 688 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 METTL16Q86W50 562 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 FCHSD1Q86WN1 690 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 CSGALNACT2Q8N6G5 542 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 ZNF579Q8NAF0 562 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 LRRC27Q9C0I9 530 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 SAMSN1Q9NSI8 373 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 OGFRQ9NZT2 677 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 C3P01024 1663 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 NFAT5O94916 1531 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 UBE2Q2LH0YL09 131 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 GOLGA8HP0CJ92 632 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 NT5C2P49902 561 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 MRPL12P52815 198 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 CCDC40Q4G0X9 1142 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 TDRD12Q587J7 1177 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 RGS22Q8NE09 1264 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms