RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PPP4R3BQ5MIZ7 849 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 TMEM179Q6ZVK1 233 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 SGMS1Q86VZ5 419 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 LY9Q9HBG7 655 aa18.77■□□□□ 0.6
CLTCL1-207ENST00000611723 SSC5DA1L4H1 1573 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 TNKSO95271 1327 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 ERICH2A1L162 156 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 USP2O75604 605 aaPredicted RBP18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 GUCY1A2P33402 732 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 NF2P35240 595 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 DLK2Q6UY11 383 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 ZKSCAN3Q9BRR0 538 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 CABP5Q9NP86 173 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 GPHNQ9NQX3 736 aaPredicted RBP18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 LIMCH1Q9UPQ0 1083 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 MYH8P13535 1937 aa18.76■□□□□ 0.59
CLTCL1-207ENST00000611723 WDR33Q9C0J8 1336 aaKnown RBP18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 NMT2O60551 498 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 ANP32AP39687 249 aaKnown RBP18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 JAG1P78504 1218 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 FGD1P98174 961 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 WTAPQ15007 396 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 MAP3K11Q16584 847 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 RCSD1Q6JBY9 416 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 BRF1Q92994 677 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 KANSL2Q9H9L4 492 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 MTMR4Q9NYA4 1195 aa18.75■□□□□ 0.59
CLTCL1-207ENST00000611723 GREB1LQ9C091 1923 aaPredicted RBP18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 MPHOSPH10O00566 681 aaKnown RBP18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 PPP1R12BO60237 982 aaPredicted RBP18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 GDF11O95390 407 aa18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 GH2P01242 217 aa18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 MKL1Q969V6 931 aa18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 ZNF274Q96GC6 653 aaPredicted RBP18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 CEP95Q96GE4 821 aa18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 ZSCAN31Q96LW9 406 aaPredicted RBP18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 NYAP2Q9P242 653 aa18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 ABT1Q9ULW3 272 aaKnown RBP18.74■□□□□ 0.59
CLTCL1-207ENST00000611723 ASNSP08243 561 aa18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 MAP3K9P80192 1104 aa18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 NOL9Q5SY16 702 aaKnown RBP18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 IFIT1BQ5T764 474 aaKnown RBP18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 TBC1D2Q9BYX2 928 aa18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 SENP2Q9HC62 589 aa18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 ZBTB21Q9ULJ3 1066 aa18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 TPCN1Q9ULQ1 816 aa18.73■□□□□ 0.59
CLTCL1-207ENST00000611723 UNCXA6NJT0 531 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 TTLL1O95922 423 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 INPP5BP32019 993 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 RCAN1P53805 252 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 APOBRQ0VD83 1088 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 BECN1Q14457 450 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 SEPT2Q15019 361 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 SHROOM1Q2M3G4 852 aaPredicted RBP18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 SIAH1Q8IUQ4 282 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 HSCBQ8IWL3 235 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 WRNIP1Q96S55 665 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 SYNPO2Q9UMS6 1093 aa18.72■□□□□ 0.59
CLTCL1-207ENST00000611723 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 K7ELQ4 463 aaPredicted RBP18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 TRAF5O00463 557 aa18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 TOP1P11387 765 aaKnown RBP18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 GRM1Q13255 1194 aa18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 SCYL3Q8IZE3 742 aa18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 TMEM47Q9BQJ4 181 aa18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 SH2B1Q9NRF2 756 aaPredicted RBP18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 TSKSQ9UJT2 592 aa18.71■□□□□ 0.59
CLTCL1-207ENST00000611723 KLF18A0A0U1RQI7 1052 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 PDIA3P30101 505 aaKnown RBP18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 FKBP1BP68106 108 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 ME3Q16798 604 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 NFXL1Q6ZNB6 911 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 ARMC9Q7Z3E5 817 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 LARP6Q9BRS8 491 aaKnown RBP18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 STX8Q9UNK0 236 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 THSD7BQ9C0I4 1608 aa18.7■□□□□ 0.58
CLTCL1-207ENST00000611723 CCDC85CA6NKD9 419 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 PFKFB2O60825 505 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 EEF2P13639 858 aaKnown RBP18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 MAP2K1Q02750 393 aaPredicted RBP18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 ICA1Q05084 483 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 RAB3GAP1Q15042 981 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 LDLRAD1Q5T700 205 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 CYP4F22Q6NT55 531 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 APOA5Q6Q788 366 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 SYNE3Q6ZMZ3 975 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 PAXIP1Q6ZW49 1069 aaPredicted RBP18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 CATIPQ7Z7H3 387 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 MAP3K14Q99558 947 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 KAT14Q9H8E8 782 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 FZD1Q9UP38 647 aa18.69■□□□□ 0.58
CLTCL1-207ENST00000611723 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms