RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 TTC16Q8NEE8 873 aa10.21□□□□□ -0.77
FAM228B-205ENST00000611127 MRPL18Q9H0U6 180 aaKnown RBP10.21□□□□□ -0.77
FAM228B-205ENST00000611127 ELP3Q9H9T3 547 aa10.21□□□□□ -0.77
FAM228B-205ENST00000611127 CD2APQ9Y5K6 639 aa10.21□□□□□ -0.77
FAM228B-205ENST00000611127 C5P01031 1676 aa10.21□□□□□ -0.78
FAM228B-205ENST00000611127 QSER1Q2KHR3 1735 aa10.21□□□□□ -0.78
FAM228B-205ENST00000611127 PATL2C9JE40 543 aaKnown RBP10.2□□□□□ -0.78
FAM228B-205ENST00000611127 RFC4P35249 363 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 CRKLP46109 303 aaKnown RBP10.2□□□□□ -0.78
FAM228B-205ENST00000611127 TEFQ10587 303 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 B4GALNT3Q6L9W6 998 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 ZNF438Q7Z4V0 828 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 TTC5Q8N0Z6 440 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 TMEM130Q8N3G9 435 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 IL17REQ8NFR9 667 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 NLGN2Q8NFZ4 835 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 PHACTR3Q96KR7 559 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 TRAIPQ9BWF2 469 aa10.2□□□□□ -0.78
FAM228B-205ENST00000611127 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
FAM228B-205ENST00000611127 KAT6BQ8WYB5 2073 aa10.19□□□□□ -0.78
FAM228B-205ENST00000611127 ITGB4P16144 1822 aa10.19□□□□□ -0.78
FAM228B-205ENST00000611127 ITGB7P26010 798 aa10.19□□□□□ -0.78
FAM228B-205ENST00000611127 MZF1P28698 734 aaPredicted RBP10.19□□□□□ -0.78
FAM228B-205ENST00000611127 SLC39A6Q13433 755 aa10.19□□□□□ -0.78
FAM228B-205ENST00000611127 RALBP1Q15311 655 aa10.19□□□□□ -0.78
FAM228B-205ENST00000611127 GTF3C2Q8WUA4 911 aaPredicted RBP10.19□□□□□ -0.78
FAM228B-205ENST00000611127 WFDC12Q8WWY7 111 aa10.19□□□□□ -0.78
FAM228B-205ENST00000611127 PPME1Q9Y570 386 aa10.19□□□□□ -0.78
FAM228B-205ENST00000611127 NEFMP07197 916 aa10.18□□□□□ -0.78
FAM228B-205ENST00000611127 MMP10P09238 476 aa10.18□□□□□ -0.78
FAM228B-205ENST00000611127 INTS5Q6P9B9 1019 aaKnown RBP10.18□□□□□ -0.78
FAM228B-205ENST00000611127 DNAJC10Q8IXB1 793 aa10.18□□□□□ -0.78
FAM228B-205ENST00000611127 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
FAM228B-205ENST00000611127 PMEPA1Q969W9 287 aa10.18□□□□□ -0.78
FAM228B-205ENST00000611127 CCDC87Q9NVE4 849 aa10.18□□□□□ -0.78
FAM228B-205ENST00000611127 MRC1P22897 1456 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 FAM177BA6PVY3 158 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 HTATSF1O43719 755 aaKnown RBP10.17□□□□□ -0.78
FAM228B-205ENST00000611127 GRIN3BO60391 1043 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 STARD3NLO95772 234 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 CYP19A1P11511 503 aaPredicted RBP10.17□□□□□ -0.78
FAM228B-205ENST00000611127 GYS1P13807 737 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 NPR3P17342 541 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 DDX10Q13206 875 aaKnown RBP10.17□□□□□ -0.78
FAM228B-205ENST00000611127 SETDB1Q15047 1291 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 NCAPG2Q86XI2 1143 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 TP53INP1Q96A56 240 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 TEX13AQ9BXU3 409 aaPredicted RBP10.17□□□□□ -0.78
FAM228B-205ENST00000611127 PNNQ9H307 717 aaKnown RBP10.17□□□□□ -0.78
FAM228B-205ENST00000611127 TRIM33Q9UPN9 1127 aa10.17□□□□□ -0.78
FAM228B-205ENST00000611127 CEMIPQ8WUJ3 1361 aa10.16□□□□□ -0.78
FAM228B-205ENST00000611127 BTBD11A6QL63 1104 aa10.16□□□□□ -0.78
FAM228B-205ENST00000611127 FAM13AO94988 1023 aa10.16□□□□□ -0.78
FAM228B-205ENST00000611127 USP5P45974 858 aa10.16□□□□□ -0.78
FAM228B-205ENST00000611127 EIF1AXP47813 144 aaKnown RBP10.16□□□□□ -0.78
FAM228B-205ENST00000611127 CEP120Q8N960 986 aa10.16□□□□□ -0.78
FAM228B-205ENST00000611127 EDEM1Q92611 657 aa10.16□□□□□ -0.78
FAM228B-205ENST00000611127 AKTIPQ9H8T0 292 aa10.16□□□□□ -0.78
FAM228B-205ENST00000611127 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 PDGFAP04085 211 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 CDC27P30260 824 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
FAM228B-205ENST00000611127 IREB2P48200 963 aaKnown RBP10.15□□□□□ -0.78
FAM228B-205ENST00000611127 TGFB2P61812 414 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 DNM1Q05193 864 aaKnown RBP10.15□□□□□ -0.78
FAM228B-205ENST00000611127 EHHADHQ08426 723 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 ZMYM1Q5SVZ6 1142 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 COL13A1Q5TAT6 717 aaPredicted RBP10.15□□□□□ -0.78
FAM228B-205ENST00000611127 CEP135Q66GS9 1140 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 FAM117BQ6P1L5 589 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 ATCAYQ86WG3 371 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 ZNF496Q96IT1 587 aaPredicted RBP10.15□□□□□ -0.78
FAM228B-205ENST00000611127 FMNL2Q96PY5 1086 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 PBX4Q9BYU1 374 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 COL24A1Q17RW2 1714 aa10.15□□□□□ -0.78
FAM228B-205ENST00000611127 SOS1Q07889 1333 aaPredicted RBP10.14□□□□□ -0.79
FAM228B-205ENST00000611127 USP42Q9H9J4 1324 aaKnown RBP10.14□□□□□ -0.79
FAM228B-205ENST00000611127 PTPRAP18433 802 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 MPSTP25325 297 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 NOS3P29474 1203 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 Q8N3U1 123 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 TMEM63CQ9P1W3 806 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 SRP68Q9UHB9 627 aaKnown RBP10.14□□□□□ -0.79
FAM228B-205ENST00000611127 TAF1LQ8IZX4 1826 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 TUBGCP6Q96RT7 1819 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 HEG1Q9ULI3 1381 aa10.14□□□□□ -0.79
FAM228B-205ENST00000611127 KCPQ6ZWJ8 1503 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 A0A087WZG4 1122 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 YBX3P16989 372 aaKnown RBP eCLIP10.13□□□□□ -0.79
FAM228B-205ENST00000611127 CANXP27824 592 aaKnown RBP10.13□□□□□ -0.79
FAM228B-205ENST00000611127 ATP11AP98196 1134 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 PRSS36Q5K4E3 855 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 MCM10Q7L590 875 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 SLC51AQ86UW1 340 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 NARFQ9UHQ1 456 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
FAM228B-205ENST00000611127 ADAMTS7Q9UKP4 1686 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 CES1P23141 567 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms