RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CUL4AQ13619 759 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 LARGE2Q8N3Y3 721 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 GIMAP7Q8NHV1 300 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 PAIP2Q9BPZ3 127 aaKnown RBP15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 STK32BQ9NY57 414 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 BIRC3Q13489 604 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 NBPF14Q5TI25 921 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 SLF1Q9BQI6 1058 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 USP40Q9NVE5 1235 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 DNM3Q9UQ16 869 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 CALUO43852 315 aaPredicted RBP15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 NDUFA8P51970 172 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 TRPM1Q7Z4N2 1603 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 MAP3K4Q9Y6R4 1608 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 TLDC2A0PJX2 215 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 CHD1O14646 1710 aa15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 WDR17Q8IZU2 1322 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 SMIM23A6NLE4 172 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CFBP00751 764 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 HARSP12081 509 aaKnown RBP15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 IL6STP40189 918 aaPredicted RBP15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 ADKP55263 362 aaKnown RBP15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 PTPN12Q05209 780 aaKnown RBP15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 ASIC2Q16515 512 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CFAP58Q5T655 872 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 M0R2C6 588 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 DDX39AO00148 427 aaKnown RBP15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 TNFAIP3P21580 790 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 FNBP1Q96RU3 617 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 ATP2A1O14983 1001 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 LRMPQ12912 555 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 SLC9C1Q4G0N8 1177 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 MAEAQ7L5Y9 396 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CPXCR1Q8N123 301 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 SECISBP2LQ93073 1101 aaKnown RBP15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CLTCL1P53675 1640 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 SCG2P13521 617 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 SMTNP53814 917 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 RNASE9P60153 205 aaKnown RBP15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 POLA2Q14181 598 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 USPL1Q5W0Q7 1092 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CCDC25Q86WR0 208 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 PPP1R14CQ8TAE6 165 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
PCDHB16-201ENST00000609684 CPSF1Q10570 1443 aaKnown RBP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 SASH1O94885 1247 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 KRT5P13647 590 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 MAGEA1P43355 309 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 INF2Q27J81 1249 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 PI16Q6UXB8 463 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 KRBA2Q6ZNG9 492 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 NSUN7Q8NE18 718 aaKnown RBP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 SELENOSQ9BQE4 189 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 ZEB2O60315 1214 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 TUBB2AQ13885 445 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 TUBB2BQ9BVA1 445 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 MTRF1LQ9UGC7 380 aaKnown RBP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 MTUS1Q9ULD2 1270 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 BCORL1Q5H9F3 1711 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 KIF4AO95239 1232 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 GOLGA8HP0CJ92 632 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 MYCLP12524 364 aaPredicted RBP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 PPP1R7Q15435 360 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 IQCGQ9H095 443 aaKnown RBP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 STMN4Q9H169 189 aaPredicted RBP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 ERCC6L2Q5T890 1561 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 C8orf74Q6P047 294 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 APOA5Q6Q788 366 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 NBPF11Q86T75 865 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 TEKT1Q969V4 418 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 NSRP1Q9H0G5 558 aaKnown RBP15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 PICK1Q9NRD5 415 aa15.89■□□□□ 0.13
PCDHB16-201ENST00000609684 NOX5Q96PH1 765 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 ALDH1B1P30837 517 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 CALCOCO2Q13137 446 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 CCDC84Q86UT8 332 aaPredicted RBP15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 PI4K2BQ8TCG2 481 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 FAM207AQ9NSI2 230 aaPredicted RBP15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 UTP14CQ5TAP6 766 aaKnown RBP15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 SEL1L2Q5TEA6 688 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 RTEL1Q9NZ71 1219 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 SPOPO43791 374 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 WDR44Q5JSH3 913 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 MYCT1Q8N699 235 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 ARFGAP2Q8N6H7 521 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 SEC31BQ9NQW1 1179 aa15.88■□□□□ 0.13
PCDHB16-201ENST00000609684 CARMIL3Q8ND23 1372 aa15.87■□□□□ 0.13
PCDHB16-201ENST00000609684 ECM2O94769 699 aaPredicted RBP15.87■□□□□ 0.13
PCDHB16-201ENST00000609684 ZMYND15Q9H091 742 aa15.87■□□□□ 0.13
PCDHB16-201ENST00000609684 DDAH1O94760 285 aa15.87■□□□□ 0.13
PCDHB16-201ENST00000609684 NCBP1Q09161 790 aaKnown RBP15.87■□□□□ 0.13
PCDHB16-201ENST00000609684 STK24Q9Y6E0 443 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms