RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 SEC23AQ15436 765 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 USP49Q70CQ1 688 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 GPR161Q8N6U8 529 aaKnown RBP16.68■□□□□ 0.26
CTCFL-219ENST00000608720 MIGA1Q8NAN2 632 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
CTCFL-219ENST00000608720 UBXN6Q9BZV1 441 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 ST7Q9NRC1 585 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 MRFAP1Q9Y605 127 aa16.68■□□□□ 0.26
CTCFL-219ENST00000608720 KRT2P35908 639 aa16.67■□□□□ 0.26
CTCFL-219ENST00000608720 CCDC152Q4G0S7 254 aa16.67■□□□□ 0.26
CTCFL-219ENST00000608720 CTR9Q6PD62 1173 aa16.67■□□□□ 0.26
CTCFL-219ENST00000608720 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
CTCFL-219ENST00000608720 FERMT2Q96AC1 680 aa16.67■□□□□ 0.26
CTCFL-219ENST00000608720 DHX58Q96C10 678 aa16.67■□□□□ 0.26
CTCFL-219ENST00000608720 SEC31BQ9NQW1 1179 aa16.67■□□□□ 0.26
CTCFL-219ENST00000608720 PRPF3O43395 683 aaKnown RBP16.66■□□□□ 0.26
CTCFL-219ENST00000608720 CYP7A1P22680 504 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 KIFC2Q96AC6 838 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 CTAGE1Q96RT6 745 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 ECM29Q5VYK3 1845 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 SEMA3EO15041 775 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 TNKSO95271 1327 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 CCDC175P0C221 793 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 PAGE5Q96GU1 130 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 GSDMAQ96QA5 445 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 PHF20Q9BVI0 1012 aa16.66■□□□□ 0.26
CTCFL-219ENST00000608720 MYH3P11055 1940 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
CTCFL-219ENST00000608720 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 PKN1Q16512 942 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 BRMS1Q9HCU9 246 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
CTCFL-219ENST00000608720 GPS2Q13227 327 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 CUL4BQ13620 913 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 PARP10Q53GL7 1025 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 RSRC2Q7L4I2 434 aaKnown RBP16.65■□□□□ 0.26
CTCFL-219ENST00000608720 APTXQ7Z2E3 356 aaKnown RBP16.65■□□□□ 0.26
CTCFL-219ENST00000608720 CATIPQ7Z7H3 387 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 RABGGTAQ92696 567 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 ZSCAN10Q96SZ4 725 aaPredicted RBP16.65■□□□□ 0.26
CTCFL-219ENST00000608720 RBM28Q9NW13 759 aaKnown RBP16.65■□□□□ 0.26
CTCFL-219ENST00000608720 ANKRD36CQ5JPF3 1778 aa16.65■□□□□ 0.26
CTCFL-219ENST00000608720 FUT2Q10981 343 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 IGSF22Q8N9C0 903 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 RASSF4Q9H2L5 321 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 A0A087X0B3 334 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 CALM1P0DP23 149 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 CALM2P0DP24 149 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 CALM3P0DP25 149 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 AFMP43652 599 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 DPYDQ12882 1025 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 SYMPKQ92797 1274 aaKnown RBP16.64■□□□□ 0.25
CTCFL-219ENST00000608720 DESI2Q9BSY9 194 aa16.64■□□□□ 0.25
CTCFL-219ENST00000608720 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
CTCFL-219ENST00000608720 DOCK2Q92608 1830 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 NUTM2BA6NNL0 878 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-219ENST00000608720 NUTM2EB1AL46 878 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-219ENST00000608720 TEX33O43247 280 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
CTCFL-219ENST00000608720 PBX1P40424 430 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 CHRNDQ07001 517 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 RBL2Q08999 1139 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 JAKMIP3Q5VZ66 844 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 ENAHQ8N8S7 591 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-219ENST00000608720 GOLGA1Q92805 767 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 SHISA4Q96DD7 197 aa16.63■□□□□ 0.25
CTCFL-219ENST00000608720 GNL3LQ9NVN8 582 aaKnown RBP16.63■□□□□ 0.25
CTCFL-219ENST00000608720 V9GY48 417 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-219ENST00000608720 EXOC5O00471 708 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 IFIT1BQ5T764 474 aaKnown RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 KLHL10Q6JEL2 608 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 CC2D1AQ6P1N0 951 aaPredicted RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 CCDC12Q8WUD4 166 aaPredicted RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 SDR42E1Q8WUS8 393 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 CCDC51Q96ER9 411 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 MRPL44Q9H9J2 332 aaKnown RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 PSD3Q9NYI0 1048 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 CWC15Q9P013 229 aaKnown RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 ADGRG1Q9Y653 693 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 SOWAHDA6NJG2 315 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 PPP1R3GB7ZBB8 358 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 TUBB2AQ13885 445 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 EARS2Q5JPH6 523 aaKnown RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 ADGRA1Q86SQ6 560 aa16.62■□□□□ 0.25
CTCFL-219ENST00000608720 CDC5LQ99459 802 aaKnown RBP16.62■□□□□ 0.25
CTCFL-219ENST00000608720 TUBB2BQ9BVA1 445 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms