RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 MAPK4P31152 587 aa16.51■□□□□ 0.23
CTSA-218ENST00000607814 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
CTSA-218ENST00000607814 GPRC5AQ8NFJ5 357 aa16.51■□□□□ 0.23
CTSA-218ENST00000607814 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
CTSA-218ENST00000607814 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
CTSA-218ENST00000607814 PRUNE2Q8WUY3 3088 aa16.5■□□□□ 0.23
CTSA-218ENST00000607814 ZKSCAN1P17029 563 aaPredicted RBP16.5■□□□□ 0.23
CTSA-218ENST00000607814 BACE1P56817 501 aa16.5■□□□□ 0.23
CTSA-218ENST00000607814 PPP4CP60510 307 aa16.5■□□□□ 0.23
CTSA-218ENST00000607814 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
CTSA-218ENST00000607814 SLC9C2Q5TAH2 1124 aa16.5■□□□□ 0.23
CTSA-218ENST00000607814 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
CTSA-218ENST00000607814 TMOD4Q9NZQ9 345 aa16.5■□□□□ 0.23
CTSA-218ENST00000607814 PALD1Q9ULE6 856 aa16.5■□□□□ 0.23
CTSA-218ENST00000607814 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 ATP5JP18859 108 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 RGS2P41220 211 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
CTSA-218ENST00000607814 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
CTSA-218ENST00000607814 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
CTSA-218ENST00000607814 LRRC26Q2I0M4 334 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 LHX8Q68G74 356 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 USP6NLQ92738 828 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 GINM1Q9NU53 330 aa16.49■□□□□ 0.23
CTSA-218ENST00000607814 ZNF532Q9HCE3 1301 aa16.48■□□□□ 0.23
CTSA-218ENST00000607814 ASNSP08243 561 aa16.48■□□□□ 0.23
CTSA-218ENST00000607814 PDE6AP16499 860 aa16.48■□□□□ 0.23
CTSA-218ENST00000607814 HERVK_113P62684 666 aa16.48■□□□□ 0.23
CTSA-218ENST00000607814 GUCD1Q96NT3 240 aa16.48■□□□□ 0.23
CTSA-218ENST00000607814 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
CTSA-218ENST00000607814 LBHD1Q9BQE6 289 aaPredicted RBP16.48■□□□□ 0.23
CTSA-218ENST00000607814 DHX36Q9H2U1 1008 aaKnown RBP16.48■□□□□ 0.23
CTSA-218ENST00000607814 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
CTSA-218ENST00000607814 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
CTSA-218ENST00000607814 FLT1P17948 1338 aa16.47■□□□□ 0.23
CTSA-218ENST00000607814 USP5P45974 858 aa16.47■□□□□ 0.23
CTSA-218ENST00000607814 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
CTSA-218ENST00000607814 MTMR2Q13614 643 aa16.47■□□□□ 0.23
CTSA-218ENST00000607814 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
CTSA-218ENST00000607814 SHROOM1Q2M3G4 852 aaPredicted RBP16.47■□□□□ 0.23
CTSA-218ENST00000607814 CCAR1Q8IX12 1150 aaKnown RBP16.47■□□□□ 0.23
CTSA-218ENST00000607814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
CTSA-218ENST00000607814 APBA2Q99767 749 aa16.47■□□□□ 0.23
CTSA-218ENST00000607814 HAUS7Q99871 368 aa16.47■□□□□ 0.23
CTSA-218ENST00000607814 TXNRD2Q9NNW7 524 aa16.47■□□□□ 0.23
CTSA-218ENST00000607814 MAGEB6P1A0A0J9YX57 407 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 TCRBV5S4A2TA0A5A2 114 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 MSCO60682 206 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 PLCG2P16885 1265 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 ERVK-24P63145 666 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 EVX2Q03828 476 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 MORN1Q5T089 497 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 RBPJLQ9UBG7 517 aa16.46■□□□□ 0.23
CTSA-218ENST00000607814 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.22
CTSA-218ENST00000607814 USP17L10C9JJH3 530 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 CCND3P30281 292 aaPredicted RBP16.45■□□□□ 0.22
CTSA-218ENST00000607814 JAG1P78504 1218 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 ZNF697Q5TEC3 545 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 ANKRD45Q5TZF3 282 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 GPR142Q7Z601 462 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 PLEKHH3Q7Z736 793 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 LCORLQ8N3X6 602 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
CTSA-218ENST00000607814 ARMT1Q9H993 441 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 CDH23Q9H251 3354 aa16.45■□□□□ 0.22
CTSA-218ENST00000607814 PRKAB2O43741 272 aa16.44■□□□□ 0.22
CTSA-218ENST00000607814 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
CTSA-218ENST00000607814 METTL16Q86W50 562 aaKnown RBP16.44■□□□□ 0.22
CTSA-218ENST00000607814 SDR42E1Q8WUS8 393 aa16.44■□□□□ 0.22
CTSA-218ENST00000607814 DNAJC18Q9H819 358 aa16.44■□□□□ 0.22
CTSA-218ENST00000607814 PRKAG2Q9UGJ0 569 aa16.44■□□□□ 0.22
CTSA-218ENST00000607814 MUC3AQ02505 3323 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 GDF11O95390 407 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 IGHDP01880 384 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 ADD2P35612 726 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 MFSD14CQ5VZR4 134 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
CTSA-218ENST00000607814 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
CTSA-218ENST00000607814 PORCNQ9H237 461 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 CDK5RAP2Q96SN8 1893 aa16.43■□□□□ 0.22
CTSA-218ENST00000607814 CYP2D6P10635 497 aa16.42■□□□□ 0.22
CTSA-218ENST00000607814 CCNA1P78396 465 aa16.42■□□□□ 0.22
CTSA-218ENST00000607814 CCL14Q16627 93 aa16.42■□□□□ 0.22
CTSA-218ENST00000607814 Q3C1V9 767 aa16.42■□□□□ 0.22
CTSA-218ENST00000607814 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
CTSA-218ENST00000607814 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
CTSA-218ENST00000607814 LPAR1Q92633 364 aa16.42■□□□□ 0.22
CTSA-218ENST00000607814 RABGAP1Q9Y3P9 1069 aa16.42■□□□□ 0.22
CTSA-218ENST00000607814 FRMPD3Q5JV73 1810 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 SMIM22K7EJ46 135 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 DNM1LO00429 736 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 IGSF3O75054 1194 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 MBD4O95243 580 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 HOXC6P09630 235 aa16.41■□□□□ 0.22
CTSA-218ENST00000607814 PLCD1P51178 756 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms